RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 LRFN4Q6PJG9 635 aa10.49□□□□□ -0.73
CSNK1D-218ENST00000581655 Q6ZSV7 163 aa10.49□□□□□ -0.73
CSNK1D-218ENST00000581655 PXKQ7Z7A4 578 aa10.49□□□□□ -0.73
CSNK1D-218ENST00000581655 MUC20Q8N307 709 aaPredicted RBP10.49□□□□□ -0.73
CSNK1D-218ENST00000581655 ZSCAN4Q8NAM6 433 aaPredicted RBP10.49□□□□□ -0.73
CSNK1D-218ENST00000581655 TBC1D15Q8TC07 691 aa10.49□□□□□ -0.73
CSNK1D-218ENST00000581655 MOGAT1Q96PD6 335 aa10.49□□□□□ -0.73
CSNK1D-218ENST00000581655 SLC19A3Q9BZV2 496 aa10.49□□□□□ -0.73
CSNK1D-218ENST00000581655 CACYBPQ9HB71 228 aaKnown RBP10.49□□□□□ -0.73
CSNK1D-218ENST00000581655 MRPL39Q9NYK5 338 aaKnown RBP10.49□□□□□ -0.73
CSNK1D-218ENST00000581655 BTNL2Q9UIR0 455 aa10.49□□□□□ -0.73
CSNK1D-218ENST00000581655 DNAH3Q8TD57 4116 aa10.49□□□□□ -0.73
CSNK1D-218ENST00000581655 LOC100653049A0A140TA62 436 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 E9PBE3 544 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 PLPP3O14495 311 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 TNFRSF13BO14836 293 aaPredicted RBP10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 KRT34O76011 436 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 IGHV4-59P01825 116 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 MMP7P09237 267 aaPredicted RBP10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 ETFAP13804 333 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 KRT4P19013 534 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 HTR2AP28223 471 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 DPY19L1Q2PZI1 675 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 TTMPQ5BVD1 217 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 ALG10BQ5I7T1 473 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 PABPC1L2AQ5JQF8 200 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 RFPL4BQ6ZWI9 263 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 KLBQ86Z14 1044 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 LRRC18Q8N456 261 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 C10orf53Q8N6V4 93 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 HIPK4Q8NE63 616 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 OR6S1Q8NH40 331 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 OR6X1Q8NH79 312 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 SLC38A5Q8WUX1 472 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 PPP1R14AQ96A00 147 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 POM121L2Q96KW2 1035 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 SAMD8Q96LT4 415 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 NUDT16L1Q9BRJ7 211 aaKnown RBP10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 AKTIPQ9H8T0 292 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 AURKAIP1Q9NWT8 199 aaPredicted RBP10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 EIF3KQ9UBQ5 218 aaKnown RBP10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 PPP1R3CQ9UQK1 317 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 IFT52Q9Y366 437 aa10.48□□□□□ -0.73
CSNK1D-218ENST00000581655 C5orf49A4QMS7 147 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 TMEM178BH3BS89 294 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 TIMM8AO60220 97 aaPredicted RBP10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 ZNF205O95201 554 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 QDPRP09417 244 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 ADORA3P0DMS8 318 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 TNFRSF1AP19438 455 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 STOMP27105 288 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 CLNS1AP54105 237 aaKnown RBP10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 PCBP3P57721 371 aaKnown RBP10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 PPP1CBP62140 327 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 CDK5R2Q13319 367 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 MELKQ14680 651 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 PDCD4Q53EL6 469 aaKnown RBP10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 OXLD1Q5BKU9 147 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 MTX3Q5HYI7 312 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 UNQ6126/PRO20091Q6UXV3 157 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 SLC35D2Q76EJ3 337 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 FITM2Q8N6M3 262 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 LSMEM1Q8N8F7 131 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 ABHD4Q8TB40 342 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 DNAJA4Q8WW22 397 aaPredicted RBP10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 ITLN1Q8WWA0 313 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 SGCDQ92629 289 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 SLC35B4Q969S0 331 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 ZNF566Q969W8 418 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 TMEM19Q96HH6 336 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 PLEKHA8Q96JA3 519 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 EPYCQ99645 322 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 PCGF1Q9BSM1 259 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 C16orf95Q9H693 158 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 NECAP2Q9NVZ3 263 aa10.47□□□□□ -0.73
CSNK1D-218ENST00000581655 LOC100509620A0A075B734 347 aa10.46□□□□□ -0.73
CSNK1D-218ENST00000581655 SMIM23A6NLE4 172 aa10.46□□□□□ -0.73
CSNK1D-218ENST00000581655 KRT75O95678 551 aa10.46□□□□□ -0.73
CSNK1D-218ENST00000581655 TNFSF4P23510 183 aa10.46□□□□□ -0.73
CSNK1D-218ENST00000581655 CRATP43155 626 aa10.46□□□□□ -0.73
CSNK1D-218ENST00000581655 MVDP53602 400 aa10.46□□□□□ -0.73
CSNK1D-218ENST00000581655 DSTNP60981 165 aa10.46□□□□□ -0.73
CSNK1D-218ENST00000581655 EGR3Q06889 387 aa10.46□□□□□ -0.73
CSNK1D-218ENST00000581655 BST1Q10588 318 aa10.46□□□□□ -0.73
CSNK1D-218ENST00000581655 SLC27A4Q6P1M0 643 aa10.46□□□□□ -0.73
CSNK1D-218ENST00000581655 OR2Z1Q8NG97 314 aa10.46□□□□□ -0.73
CSNK1D-218ENST00000581655 NEIL1Q96FI4 390 aaPredicted RBP10.46□□□□□ -0.73
CSNK1D-218ENST00000581655 SLC25A44Q96H78 314 aaPredicted RBP10.46□□□□□ -0.73
CSNK1D-218ENST00000581655 TEX37Q96LM6 180 aa10.46□□□□□ -0.73
CSNK1D-218ENST00000581655 RHOXF2Q9BQY4 288 aa10.46□□□□□ -0.73
CSNK1D-218ENST00000581655 A4GALTQ9NPC4 353 aa10.46□□□□□ -0.73
CSNK1D-218ENST00000581655 MIOXQ9UGB7 285 aa10.46□□□□□ -0.73
CSNK1D-218ENST00000581655 A0A0G2JPF8 293 aa10.45□□□□□ -0.74
CSNK1D-218ENST00000581655 ZNF816-ZNF321PA0A0X1KG74 233 aa10.45□□□□□ -0.74
CSNK1D-218ENST00000581655 HNRNPCL2B2RXH8 293 aa10.45□□□□□ -0.74
CSNK1D-218ENST00000581655 HNRNPCL3B7ZW38 293 aa10.45□□□□□ -0.74
CSNK1D-218ENST00000581655 H3BSA7 217 aa10.45□□□□□ -0.74
CSNK1D-218ENST00000581655 HNRNPCL1O60812 293 aaKnown RBP10.45□□□□□ -0.74
CSNK1D-218ENST00000581655 SFTPBP07988 381 aa10.45□□□□□ -0.74
CSNK1D-218ENST00000581655 PGA4P0DJD7 388 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms