RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 NPTNQ9Y639 398 aa11.49□□□□□ -0.57
UPF3AP2-202ENST00000578315 PRKDCP78527 4128 aaKnown RBP11.49□□□□□ -0.57
UPF3AP2-202ENST00000578315 PPIAL4EA0A075B759 164 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 PPIAL4CA0A0B4J2A2 164 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 CPSF4LA6NMK7 179 aaKnown RBP11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 PPIAL4DF5H284 164 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 UBDO15205 165 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 MMP7P09237 267 aaPredicted RBP11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 PPIAL4FP0DN26 164 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 UMPSP11172 480 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 HOXB9P17482 250 aaPredicted RBP11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 STOMP27105 288 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 WNT5AP41221 380 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 ZNF84P51523 738 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 SLC3A1Q07837 685 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 SCARB2Q14108 478 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 ZNF74Q16587 644 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 HHATQ5VTY9 493 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 MAVSQ7Z434 540 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 DPPA2Q7Z7J5 298 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 ARMC8Q8IUR7 673 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 MSRB3Q8IXL7 192 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 HIPK4Q8NE63 616 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 KLF14Q8TD94 323 aaPredicted RBP11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 MARS2Q96GW9 593 aaKnown RBP11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 MCHR1Q99705 422 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 MS4A7Q9GZW8 240 aaPredicted RBP11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 MSL2Q9HCI7 577 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 NANSQ9NR45 359 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 EIF3KQ9UBQ5 218 aaKnown RBP11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 TRIM33Q9UPN9 1127 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 INSIG2Q9Y5U4 225 aa11.48□□□□□ -0.57
UPF3AP2-202ENST00000578315 LOC100509620A0A075B734 347 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 C5orf49A4QMS7 147 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 PRORSD1PA6NEY8 169 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 BLOC1S5-TXNDC5H3BN57 136 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 IGHV2-70P01814 119 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 IGHG1P01857 330 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 IGHMP01871 453 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 IGHV4-38-2P0DP08 117 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 ZNF12P17014 697 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 CDAP32320 146 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 SWT1Q5T5J6 900 aaKnown RBP11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 LINC00114Q6XXX2 140 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 SPATC1Q76KD6 591 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 BHLHE22Q8NFJ8 381 aaPredicted RBP11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 AKR7LQ8NHP1 331 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 ABHD4Q8TB40 342 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 TMIGD2Q96BF3 282 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 MAELQ96JY0 434 aaKnown RBP11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 ZNF607Q96SK3 696 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 MRI1Q9BV20 369 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 SLITRK2Q9H156 845 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 IKZF5Q9H5V7 419 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 CCNB1IP1Q9NPC3 277 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 THAP1Q9NVV9 213 aa11.47□□□□□ -0.57
UPF3AP2-202ENST00000578315 MDFIC2A0A1B0GVS7 189 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 CHP2O43745 196 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 SNNO75324 88 aaPredicted RBP11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 SERPINB7O75635 380 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 SLC2A10O95528 541 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 OPN1SWP03999 348 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 THY1P04216 161 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 HIST1H2ABP04908 130 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 F13BP05160 661 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 ZNF32P17041 273 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 SLC6A2P23975 617 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 SLC6A9P48067 706 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 TNFAIP6P98066 277 aaPredicted RBP11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 NPTX1Q15818 432 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 SGCAQ16586 387 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 ENTPD8Q5MY95 495 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 ZNF613Q6PF04 617 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 TTC33Q6PID6 262 aaPredicted RBP11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 RFPL4BQ6ZWI9 263 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 HIST3H2AQ7L7L0 130 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 RBM45Q8IUH3 476 aaKnown RBP11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 KLHL36Q8N4N3 616 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 NOXO1Q8NFA2 376 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 OR52E2Q8NGJ4 325 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 VANGL1Q8TAA9 524 aaPredicted RBP11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 HIST1H2ACQ93077 130 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 POM121L2Q96KW2 1035 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 KCNN2Q9H2S1 579 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 PATZ1Q9HBE1 687 aaKnown RBP11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 TNFRSF19Q9NS68 423 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 TMEM106BQ9NUM4 274 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 VAPAQ9P0L0 249 aa11.46□□□□□ -0.57
UPF3AP2-202ENST00000578315 TANC2Q9HCD6 1990 aa11.46□□□□□ -0.58
UPF3AP2-202ENST00000578315 MCIDASD6RGH6 385 aa11.45□□□□□ -0.58
UPF3AP2-202ENST00000578315 MGRN1O60291 552 aa11.45□□□□□ -0.58
UPF3AP2-202ENST00000578315 TRMUO75648 421 aaKnown RBP11.45□□□□□ -0.58
UPF3AP2-202ENST00000578315 LYPD3O95274 346 aa11.45□□□□□ -0.58
UPF3AP2-202ENST00000578315 NGFP01138 241 aa11.45□□□□□ -0.58
UPF3AP2-202ENST00000578315 GDI2P50395 445 aaKnown RBP11.45□□□□□ -0.58
UPF3AP2-202ENST00000578315 WDR4P57081 412 aaKnown RBP11.45□□□□□ -0.58
UPF3AP2-202ENST00000578315 PPP1CBP62140 327 aa11.45□□□□□ -0.58
UPF3AP2-202ENST00000578315 ERVK-25P63136 954 aa11.45□□□□□ -0.58
UPF3AP2-202ENST00000578315 HIST3H3Q16695 136 aa11.45□□□□□ -0.58
UPF3AP2-202ENST00000578315 DUSP7Q16829 419 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms