RNA–Protein interactions for RNA: ENST00000570296.1

CLK3-227, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-227ENST00000570296 ANXA11P50995 505 aaKnown RBP14.99□□□□□ -0.01
CLK3-227ENST00000570296 CLDN8P56748 225 aa14.99□□□□□ -0.01
CLK3-227ENST00000570296 GNG11P61952 73 aa14.99□□□□□ -0.01
CLK3-227ENST00000570296 RNF220Q5VTB9 566 aa14.99□□□□□ -0.01
CLK3-227ENST00000570296 C11orf88Q6PI97 169 aa14.99□□□□□ -0.01
CLK3-227ENST00000570296 WDR88Q6ZMY6 472 aa14.99□□□□□ -0.01
CLK3-227ENST00000570296 NLRC3Q7RTR2 1065 aa14.99□□□□□ -0.01
CLK3-227ENST00000570296 ZER1Q7Z7L7 766 aa14.99□□□□□ -0.01
CLK3-227ENST00000570296 OR4K5Q8NGD3 323 aa14.99□□□□□ -0.01
CLK3-227ENST00000570296 OR8J2Q8NGG1 315 aa14.99□□□□□ -0.01
CLK3-227ENST00000570296 OR8B3Q8NGG8 313 aa14.99□□□□□ -0.01
CLK3-227ENST00000570296 OR52P1PQ8NH57 321 aa14.99□□□□□ -0.01
CLK3-227ENST00000570296 TMEM54Q969K7 222 aa14.99□□□□□ -0.01
CLK3-227ENST00000570296 OR8B2Q96RD0 313 aa14.99□□□□□ -0.01
CLK3-227ENST00000570296 C12orf10Q9HB07 376 aa14.99□□□□□ -0.01
CLK3-227ENST00000570296 GLTPQ9NZD2 209 aa14.99□□□□□ -0.01
CLK3-227ENST00000570296 USH1CQ9Y6N9 552 aa14.99□□□□□ -0.01
CLK3-227ENST00000570296 IGHV1-69DA0A0B4J2H0 117 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 PRSS51A0A1B0GVH4 220 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 IGHV1-69P01742 117 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 NR2F1P10589 423 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 CCNOP22674 350 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 GABRA5P31644 462 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 WNT5AP41221 380 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 PITPNBP48739 271 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 PUDPQ08623 228 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 DEFB121Q5J5C9 76 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 VASH1Q7L8A9 365 aaPredicted RBP14.98□□□□□ -0.01
CLK3-227ENST00000570296 PXKQ7Z7A4 578 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 VRK2Q86Y07 508 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 CNPY4Q8N129 248 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 B9D2Q9BPU9 175 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 SLC35A5Q9BS91 424 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 TOR3AQ9H497 397 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 KLHL14Q9P2G3 628 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 CLN8Q9UBY8 286 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 VPREB3Q9UKI3 123 aa14.98□□□□□ -0.01
CLK3-227ENST00000570296 A0A0U1RQK1 487 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 BTBD17A6NE02 478 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 TMEM233B4DJY2 109 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 PHYHO14832 338 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 SURF4O15260 269 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 GLRA3O75311 464 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 CPSF4O95639 269 aaKnown RBP14.97□□□□□ -0.01
CLK3-227ENST00000570296 G6PDP11413 515 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 CBLP22681 906 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 AHCYP23526 432 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 STOMP27105 288 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 GCAP28676 217 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 MMP16P51512 607 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 HSF2Q03933 536 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 CCDC153Q494R4 210 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 SERPINA11Q86U17 422 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 ANKRD46Q86W74 232 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 CLIP4Q8N3C7 705 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 HIPK4Q8NE63 616 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 OR6S1Q8NH40 331 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 C10orf82Q8WW14 230 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 TBX15Q96SF7 602 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 CDADC1Q9BWV3 514 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 ASPNQ9BXN1 380 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 TSPYL1Q9H0U9 437 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 IL19Q9UHD0 177 aa14.97□□□□□ -0.01
CLK3-227ENST00000570296 ZNF443Q9Y2A4 671 aaPredicted RBP14.97□□□□□ -0.01
CLK3-227ENST00000570296 ZNF879B4DU55 563 aa14.96□□□□□ -0.01
CLK3-227ENST00000570296 RNASEK-C17orf49H0YIS7 233 aa14.96□□□□□ -0.01
CLK3-227ENST00000570296 TIMM8AO60220 97 aaPredicted RBP14.96□□□□□ -0.01
CLK3-227ENST00000570296 TOX4O94842 621 aa14.96□□□□□ -0.01
CLK3-227ENST00000570296 FSTL3O95633 263 aa14.96□□□□□ -0.01
CLK3-227ENST00000570296 MMP7P09237 267 aaPredicted RBP14.96□□□□□ -0.01
CLK3-227ENST00000570296 MMP9P14780 707 aa14.96□□□□□ -0.01
CLK3-227ENST00000570296 CPA3P15088 417 aa14.96□□□□□ -0.01
CLK3-227ENST00000570296 EPHA3P29320 983 aa14.96□□□□□ -0.01
CLK3-227ENST00000570296 ANXA8L1Q5VT79 327 aa14.96□□□□□ -0.01
CLK3-227ENST00000570296 SLC35E4Q6ICL7 350 aa14.96□□□□□ -0.01
CLK3-227ENST00000570296 LRFN4Q6PJG9 635 aa14.96□□□□□ -0.01
CLK3-227ENST00000570296 C11orf44Q8N8P7 122 aa14.96□□□□□ -0.01
CLK3-227ENST00000570296 ITLN1Q8WWA0 313 aa14.96□□□□□ -0.01
CLK3-227ENST00000570296 ITPKCQ96DU7 683 aa14.96□□□□□ -0.01
CLK3-227ENST00000570296 POM121L2Q96KW2 1035 aa14.96□□□□□ -0.01
CLK3-227ENST00000570296 MAGEB18Q96M61 343 aa14.96□□□□□ -0.01
CLK3-227ENST00000570296 TMEM246Q9BRR3 403 aa14.96□□□□□ -0.01
CLK3-227ENST00000570296 ARMC7Q9H6L4 198 aa14.96□□□□□ -0.01
CLK3-227ENST00000570296 IGKV1D-42A0A075B6H8 117 aa14.95□□□□□ -0.02
CLK3-227ENST00000570296 C22orf46C9J442 243 aa14.95□□□□□ -0.02
CLK3-227ENST00000570296 PLIN3O60664 434 aa14.95□□□□□ -0.02
CLK3-227ENST00000570296 ICMTO60725 284 aa14.95□□□□□ -0.02
CLK3-227ENST00000570296 EFNB2P52799 333 aa14.95□□□□□ -0.02
CLK3-227ENST00000570296 BIDP55957 195 aa14.95□□□□□ -0.02
CLK3-227ENST00000570296 PPP1CBP62140 327 aa14.95□□□□□ -0.02
CLK3-227ENST00000570296 PABPC1L2AQ5JQF8 200 aa14.95□□□□□ -0.02
CLK3-227ENST00000570296 WDR25Q64LD2 544 aaPredicted RBP14.95□□□□□ -0.02
CLK3-227ENST00000570296 RFPL4BQ6ZWI9 263 aa14.95□□□□□ -0.02
CLK3-227ENST00000570296 LRRC34Q8IZ02 419 aa14.95□□□□□ -0.02
CLK3-227ENST00000570296 SCCPDHQ8NBX0 429 aa14.95□□□□□ -0.02
CLK3-227ENST00000570296 OR2Z1Q8NG97 314 aa14.95□□□□□ -0.02
CLK3-227ENST00000570296 OR6X1Q8NH79 312 aa14.95□□□□□ -0.02
CLK3-227ENST00000570296 MAN2C1Q9NTJ4 1040 aa14.95□□□□□ -0.02
CLK3-227ENST00000570296 MRPL39Q9NYK5 338 aaKnown RBP14.95□□□□□ -0.02
CLK3-227ENST00000570296 RPS6KB2Q9UBS0 482 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms