RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	CACYBP	Q9HB71	228 aa	Known RBP	10.89	□□□□□ -0.67
SPG7-222	ENST00000569820	CHMP1A	Q9HD42	196 aa	Predicted RBP	10.89	□□□□□ -0.67
SPG7-222	ENST00000569820	ST6GALNAC2	Q9UJ37	374 aa		10.89	□□□□□ -0.67
SPG7-222	ENST00000569820	NTNG1	Q9Y2I2	539 aa		10.89	□□□□□ -0.67
SPG7-222	ENST00000569820		A0A087WV62	115 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	DUXA	A6NLW8	204 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	RLN1	P04808	185 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	GP1BA	P07359	652 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	SBK2	P0C263	348 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	ZGLP1	P0C6A0	271 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	GIMD1	P0DJR0	217 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	PTH2R	P49190	550 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	RGS8	P57771	180 aa	Predicted RBP	10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	DUSP5	Q16690	384 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	CDNF	Q49AH0	187 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	C9orf152	Q5JTZ5	239 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	SLC25A45	Q8N413	288 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	AKR7L	Q8NHP1	331 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	ZG16B	Q96DA0	208 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	SLC41A3	Q96GZ6	507 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	OR14A2	Q96R54	314 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	TEAD3	Q99594	435 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	SSX3	Q99909	188 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	TMEM138	Q9NPI0	162 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	KRCC1	Q9NPI7	259 aa	Predicted RBP	10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	NRIP3	Q9NQ35	241 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	CALML5	Q9NZT1	146 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	CACNA1E	Q15878	2313 aa		10.88	□□□□□ -0.67
SPG7-222	ENST00000569820	C9orf170	A2RU37	121 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	ANKRD61	A6NGH8	418 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	ACOT7	O00154	380 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	FCMR	O60667	390 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	RBBP9	O75884	186 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	IFI6	P09912	130 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	CT62	P0C5K7	136 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	PTHLH	P12272	177 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	FOLR2	P14207	255 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	P2RX1	P51575	399 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	SRSF5	Q13243	272 aa	Known RBP	10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	RBMS2	Q15434	407 aa	Known RBP	10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	MPPED2	Q15777	294 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	CSRP2	Q16527	193 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	FRRS1	Q6ZNA5	592 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	FCRLA	Q7L513	359 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	SLC36A1	Q7Z2H8	476 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	GDF7	Q7Z4P5	450 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	SLC35F3	Q8IY50	421 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	SMPDL3B	Q92485	455 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	CTHRC1	Q96CG8	243 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	SMIM19	Q96E16	107 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	S100A16	Q96FQ6	103 aa	Known RBP	10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	RBM18	Q96H35	190 aa	Known RBP	10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	TTTY10	Q9BZA0	68 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	CHRNA10	Q9GZZ6	450 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	ADGRL4	Q9HBW9	690 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	ZFP57	Q9NU63	452 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	SOHLH2	Q9NX45	425 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	KLHL28	Q9NXS3	571 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	LRIT1	Q9P2V4	623 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	SDK1	Q7Z5N4	2213 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	IGHV1OR21-1	A0A087WYE8	117 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	TMEM218	A2RU14	115 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	FAM86C2P	A6NEL3	165 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	UNC119B	A6NIH7	251 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	RFPL4A	A6NLU0	287 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	RFPL4AL1	F8VTS6	287 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	TGFBR3L	H3BV60	316 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	EIF4E2	O60573	245 aa	Known RBP	10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	AGR2	O95994	175 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	PDGFB	P01127	241 aa	Predicted RBP	10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	BMP7	P18075	431 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	NOS3	P29474	1203 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	FAU	P35544	74 aa	Known RBP	10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	PPM1F	P49593	454 aa	Predicted RBP	10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	ACTC1	P68032	377 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	ACTA1	P68133	377 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	CBFB	Q13951	182 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	FAM53B	Q14153	422 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	SMCO1	Q147U7	214 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	SHB	Q15464	509 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	GUCA2B	Q16661	112 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	LBH	Q53QV2	105 aa	Predicted RBP	10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	DGAT2L6	Q6ZPD8	337 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	MUC20	Q8N307	709 aa	Predicted RBP	10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	BOLL	Q8N9W6	283 aa	Known RBP	10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	SLC25A28	Q96A46	364 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	CD180	Q99467	661 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	MCHR1	Q99705	422 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	ADAP2	Q9NPF8	381 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	ASH2L	Q9UBL3	628 aa		10.87	□□□□□ -0.67
SPG7-222	ENST00000569820	IFITM5	A6NNB3	132 aa		10.86	□□□□□ -0.67
SPG7-222	ENST00000569820	ZNF879	B4DU55	563 aa		10.86	□□□□□ -0.67
SPG7-222	ENST00000569820	BHLHE40	O14503	412 aa		10.86	□□□□□ -0.67
SPG7-222	ENST00000569820	NUDT21	O43809	227 aa	Known RBP	10.86	□□□□□ -0.67
SPG7-222	ENST00000569820	NSA2	O95478	260 aa	Known RBP	10.86	□□□□□ -0.67
SPG7-222	ENST00000569820	THY1	P04216	161 aa		10.86	□□□□□ -0.67
SPG7-222	ENST00000569820	HEXA	P06865	529 aa		10.86	□□□□□ -0.67
SPG7-222	ENST00000569820	RNH1	P13489	461 aa	Known RBP	10.86	□□□□□ -0.67
SPG7-222	ENST00000569820	NDUFB7	P17568	137 aa		10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms