RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 TRIM33Q9UPN9 1127 aa9.95□□□□□ -0.82
GTF3C1-209ENST00000568569 PRORSD1PA6NEY8 169 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 H3BSA7 217 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 RNF13O43567 381 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 TPST1O60507 370 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 GPANK1O95872 356 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 MMP7P09237 267 aaPredicted RBP9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 PPIAL4GP0DN37 164 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 IGHV4-38-2P0DP08 117 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 BGNP21810 368 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 STOMP27105 288 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 WNT5AP41221 380 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 CDH12P55289 794 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 CLRN1P58418 232 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 SEC61A1P61619 476 aaKnown RBP9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 PAX8Q06710 450 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 SRSF4Q08170 494 aaKnown RBP9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 STX3Q13277 289 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 ESCO2Q56NI9 601 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 PABPC1L2AQ5JQF8 200 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 GCNT6Q5T4J0 391 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 BRICD5Q6PL45 260 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 RANBP3LQ86VV4 465 aaPredicted RBP9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 C1orf174Q8IYL3 243 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 LRRC18Q8N456 261 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 HIPK4Q8NE63 616 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 NFKBIDQ8NI38 313 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 SLC25A40Q8TBP6 338 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 KLF14Q8TD94 323 aaPredicted RBP9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 MCHR2Q969V1 340 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 DCLRE1CQ96SD1 692 aaKnown RBP9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 SLC19A3Q9BZV2 496 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 KCNN2Q9H2S1 579 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 BEX1Q9HBH7 125 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 TMEM106BQ9NUM4 274 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 DCAF16Q9NXF7 216 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 ZIM2Q9NZV7 527 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 EGFL7Q9UHF1 273 aa9.94□□□□□ -0.82
GTF3C1-209ENST00000568569 C5orf49A4QMS7 147 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 TRPC5OSA6NMA1 111 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 F5H0A9 414 aaPredicted RBP9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 TIMM23O14925 209 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 HDAC3O15379 428 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 PLATP00750 562 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 CRYBA1P05813 215 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 GDI2P50395 445 aaKnown RBP9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 RAG2P55895 527 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 BTG1P62324 171 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 TNFAIP6P98066 277 aaPredicted RBP9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 CDK6Q00534 326 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 BST1Q10588 318 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 ZNF74Q16587 644 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 SPRNQ5BIV9 151 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 HHATQ5VTY9 493 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 NXNQ6DKJ4 435 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 REEP3Q6NUK4 255 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 ZNF613Q6PF04 617 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 BTNL3Q6UXE8 466 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 LRRC28Q86X40 367 aaPredicted RBP9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 KIR3DL3Q8N743 410 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 NOXO1Q8NFA2 376 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 BHLHE22Q8NFJ8 381 aaPredicted RBP9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 GTF2H4Q92759 462 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 UPRTQ96BW1 309 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 POM121L2Q96KW2 1035 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 ZNF347Q96SE7 839 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 CITED1Q99966 193 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 OR2J1Q9GZK6 312 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 PAIP1Q9H074 479 aaKnown RBP9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 EVA1AQ9H8M9 152 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 MSL2Q9HCI7 577 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 CCNB1IP1Q9NPC3 277 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 NANSQ9NR45 359 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 SDR39U1Q9NRG7 319 aaPredicted RBP9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 TAS2R5Q9NYW4 299 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 IL20RAQ9UHF4 553 aa9.93□□□□□ -0.82
GTF3C1-209ENST00000568569 IGHV3OR16-10A0A075B7F0 116 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 TRAV40A0A0B4J280 105 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 FAM181BA6NEQ2 426 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 HOXA3O43365 443 aaPredicted RBP9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 CHP2O43745 196 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 TPST2O60704 377 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 CH25HO95992 272 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 TNFSF4P23510 183 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 CD80P33681 288 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 POLR2JP52435 117 aaKnown RBP9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 PPP1CBP62140 327 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 HNRNPA0Q13151 305 aaKnown RBP9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 HIST3H3Q16695 136 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 MTX3Q5HYI7 312 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 OLFML2AQ68BL7 652 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 HIST2H2BDQ6DRA6 164 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 LINC00114Q6XXX2 140 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 RFPL4BQ6ZWI9 263 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 ZER1Q7Z7L7 766 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 JAZF1Q86VZ6 243 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 ZNF283Q8N7M2 679 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 GOLGA6L1Q8N7Z2 621 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 OR9I1Q8NGQ6 314 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 ABHD4Q8TB40 342 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms