RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 FUT5Q11128 374 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 ELAVL3Q14576 367 aaKnown RBP9.95□□□□□ -0.82
PALB2-206ENST00000568219 ARHGAP19Q14CB8 494 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 TMEM64Q6YI46 380 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 UBE3DQ7Z6J8 389 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 ADIPOR2Q86V24 386 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 HSD17B11Q8NBQ5 300 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 TOMM40LQ969M1 308 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 SLC25A38Q96DW6 304 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 PGLYRP3Q96LB9 341 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 TCEAL7Q9BRU2 100 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 RAB11FIP5Q9BXF6 653 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 REG4Q9BYZ8 158 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 OR52A5Q9H2C5 316 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 C11orf49Q9H6J7 331 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 FBRSQ9HAH7 460 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 NPDC1Q9NQX5 325 aaPredicted RBP9.95□□□□□ -0.82
PALB2-206ENST00000568219 APOBEC3BQ9UH17 382 aaKnown RBP9.95□□□□□ -0.82
PALB2-206ENST00000568219 ADAM29Q9UKF5 820 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 GPR34Q9UPC5 381 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 ZNF337Q9Y3M9 751 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 MMP24Q9Y5R2 645 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 SBF1O95248 1867 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 SCN4AP35499 1836 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 SCDO00767 359 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 CLDN4O14493 209 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 ZNF354AO60765 605 aaPredicted RBP9.94□□□□□ -0.82
PALB2-206ENST00000568219 IFNA4P05014 189 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 ZNF44P15621 663 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 PTAFRP25105 342 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 CASRP41180 1078 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 GAS1P54826 345 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 RHEBQ15382 184 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 AKR1C8PQ5T2L2 129 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 AWAT2Q6E213 333 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 FAM199XQ6PEV8 388 aaPredicted RBP9.94□□□□□ -0.82
PALB2-206ENST00000568219 TCEAL8Q8IYN2 117 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 GALNT16Q8N428 558 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 OR4N2Q8NGD1 307 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 OR6N1Q8NGY5 312 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 OR6S1Q8NH40 331 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 MARCH1Q8TCQ1 289 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 UQCC1Q9NVA1 299 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 A0A087WV48 116 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 A0A0G2JK05 382 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 GALR3O60755 368 aaPredicted RBP9.94□□□□□ -0.82
PALB2-206ENST00000568219 ALOX12BO75342 701 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 S100A8P05109 93 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 NANOS3P60323 173 aaKnown RBP9.94□□□□□ -0.82
PALB2-206ENST00000568219 CYCSP99999 105 aaKnown RBP9.94□□□□□ -0.82
PALB2-206ENST00000568219 PPP1R1AQ13522 171 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 C4orf17Q53FE4 359 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 SYS1Q8N2H4 156 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 OR2A1Q8NGT9 310 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 APOBEC4Q8WW27 367 aaKnown RBP9.94□□□□□ -0.82
PALB2-206ENST00000568219 TSACCQ96A04 125 aaPredicted RBP9.94□□□□□ -0.82
PALB2-206ENST00000568219 TRMT2BQ96GJ1 504 aaKnown RBP9.94□□□□□ -0.82
PALB2-206ENST00000568219 JSRP1Q96MG2 331 aaPredicted RBP9.94□□□□□ -0.82
PALB2-206ENST00000568219 DEFB118Q96PH6 123 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 ZNF587Q96SQ5 575 aaPredicted RBP9.94□□□□□ -0.82
PALB2-206ENST00000568219 ETV7Q9Y603 341 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 LOC100289279A0A1B0GTE1 492 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 C17orf113A0A1B0GUU1 675 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 CDC14CA4D256 554 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 A6NLC8 198 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 RNASEK-C17orf49H0YIS7 233 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 LINC01387J3KSC0 135 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 SDCBPO00560 298 aaPredicted RBP9.94□□□□□ -0.82
PALB2-206ENST00000568219 GSTZ1O43708 216 aaPredicted RBP9.94□□□□□ -0.82
PALB2-206ENST00000568219 RDH16O75452 317 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 RPA2P15927 270 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 ACY1Q03154 408 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 PLA2G7Q13093 441 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 SSX2Q16385 188 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 GVQW1Q8N7I0 195 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 LINC01555Q8NAE3 123 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 OR5D18Q8NGL1 313 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 RSPO3Q9BXY4 272 aaPredicted RBP9.94□□□□□ -0.82
PALB2-206ENST00000568219 PRO1933Q9H354 126 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 CACNA1DQ01668 2161 aa9.94□□□□□ -0.82
PALB2-206ENST00000568219 ZNF646O15015 1829 aaPredicted RBP9.93□□□□□ -0.82
PALB2-206ENST00000568219 EDDM13A0A1B0GTR0 161 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 SP3Q02447 781 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 ELOCQ15369 112 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 SLC22A6Q4U2R8 563 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 ABCA11PQ4W5N1 156 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 CST9Q5W186 159 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 C12orf76Q8N812 135 aaPredicted RBP9.93□□□□□ -0.82
PALB2-206ENST00000568219 FAM174AQ8TBP5 190 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 GLYATL2Q8WU03 294 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 DGAT2Q96PD7 388 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 CLCC1Q96S66 551 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 TAF9BQ9HBM6 251 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 HRASLS2Q9NWW9 162 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 TAS2R4Q9NYW5 299 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 EMC9Q9Y3B6 208 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 A0A0A6YYD5 115 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 C4orf47A7E2U8 309 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 METTL12A8MUP2 240 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 APBB3O95704 486 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms