RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 C4orf46Q504U0 113 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 TRIM61Q5EBN2 209 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 FAM76BQ5HYJ3 339 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 GTPBP8Q8N3Z3 284 aaPredicted RBP10.04□□□□□ -0.8
TCF4-222ENST00000564228 SLC25A45Q8N413 288 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 PIP4P2Q8N4L2 257 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 ZSCAN1Q8NBB4 408 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 OR2L3Q8NG85 312 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 OR56A1Q8NGH5 318 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 PELI1Q96FA3 418 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 PEX11GQ96HA9 241 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 AMDHD1Q96NU7 426 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 MCHR1Q99705 422 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 AIF1LQ9BQI0 150 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 MS4A8Q9BY19 250 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 IL21RQ9HBE5 538 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 NOX4Q9NPH5 578 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 TREM2Q9NZC2 230 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 DHCR7Q9UBM7 475 aaKnown RBP10.04□□□□□ -0.8
TCF4-222ENST00000564228 ZNF223Q9UK11 482 aaPredicted RBP10.04□□□□□ -0.8
TCF4-222ENST00000564228 MOKQ9UQ07 419 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 ZNF337Q9Y3M9 751 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 R4GN57 208 aa10.04□□□□□ -0.8
TCF4-222ENST00000564228 NUP210LQ5VU65 1888 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 IGKV1-8A0A0C4DH67 115 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 OR6C76A6NM76 312 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 RIIAD1A6NNX1 92 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 TTLL8A6PVC2 850 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 F8VVB4 439 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 F8VWA3 439 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 SULT2B1O00204 365 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 XRCC3O43542 346 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 PRICKLE3O43900 615 aaPredicted RBP10.03□□□□□ -0.8
TCF4-222ENST00000564228 NTN1O95631 604 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 IGHV2-5P01817 119 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 THY1P04216 161 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 MRPL3P09001 348 aaKnown RBP10.03□□□□□ -0.8
TCF4-222ENST00000564228 SELLP14151 372 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 CMPK1P30085 196 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 EIF2S3P41091 472 aaKnown RBP10.03□□□□□ -0.8
TCF4-222ENST00000564228 CASRP41180 1078 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 FXYD6P3P58550 94 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 UBE2MP61081 183 aaKnown RBP10.03□□□□□ -0.8
TCF4-222ENST00000564228 PJVKQ0ZLH3 352 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 ZNF124Q15973 351 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 PEAR1Q5VY43 1037 aaPredicted RBP10.03□□□□□ -0.8
TCF4-222ENST00000564228 DRAM2Q6UX65 266 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 OLIG3Q7RTU3 272 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 NUDT13Q86X67 352 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 FAM129CQ86XR2 697 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 POMGNT2Q8NAT1 580 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 KDF1Q8NAX2 398 aaPredicted RBP10.03□□□□□ -0.8
TCF4-222ENST00000564228 SLC30A7Q8NEW0 376 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 STEAP2Q8NFT2 490 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 OR2I1PQ8NGU4 316 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 TMEM255BQ8WV15 326 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 RNF141Q8WVD5 230 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 SLC22A18Q96BI1 424 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 CD180Q99467 661 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 NRIP2Q9BQI9 281 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 TMPRSS5Q9H3S3 457 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 SMOC1Q9H4F8 434 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 GLIPR2Q9H4G4 154 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 OPA3Q9H6K4 179 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 EXO5Q9H790 373 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 PELI2Q9HAT8 420 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 TREM1Q9NP99 234 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 ACKR4Q9NPB9 350 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 UFSP2Q9NUQ7 469 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 HRASLS2Q9NWW9 162 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 RCC2Q9P258 522 aaKnown RBP10.03□□□□□ -0.8
TCF4-222ENST00000564228 GPR55Q9Y2T6 319 aaPredicted RBP10.03□□□□□ -0.8
TCF4-222ENST00000564228 SCN3AQ9NY46 2000 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 GPR179Q6PRD1 2367 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 TRBV2A0A0J9YWF9 115 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 GXYLT2A0PJZ3 443 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 LRIT2A6NDA9 550 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 OR2AT4A6NND4 320 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 NPIPB9F8W1W9 429 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 BLOC1S5-TXNDC5H3BN57 136 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 PIN1P1O15428 100 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 FRS3O43559 492 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 GALR2O43603 387 aaPredicted RBP10.03□□□□□ -0.8
TCF4-222ENST00000564228 MT-ND4LP03901 98 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 OR2T7P0C7T2 308 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 ZNF44P15621 663 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 ZNF3P17036 446 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 HLA-GP17693 338 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 EPHA8P29322 1005 aaPredicted RBP10.03□□□□□ -0.8
TCF4-222ENST00000564228 NTSP30990 170 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 FASLGP48023 281 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 CAPZA1P52907 286 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 KIR2DS3Q14952 304 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 INPP5JQ15735 1006 aaPredicted RBP10.03□□□□□ -0.8
TCF4-222ENST00000564228 PNLIPRP3Q17RR3 467 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 C14orf28Q4W4Y0 310 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 TP53I3Q53FA7 332 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 OR2B11Q5JQS5 317 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 ACER2Q5QJU3 275 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms