RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 DNTTIP1Q9H147 329 aa3□□□□□ -1.93
CASC4-206ENST00000558847 CLSTN2Q9H4D0 955 aa3□□□□□ -1.93
CASC4-206ENST00000558847 RPF2Q9H7B2 306 aaKnown RBP3□□□□□ -1.93
CASC4-206ENST00000558847 UGT1A7Q9HAW7 530 aa3□□□□□ -1.93
CASC4-206ENST00000558847 UGT1A10Q9HAW8 530 aa3□□□□□ -1.93
CASC4-206ENST00000558847 UGT1A8Q9HAW9 530 aa3□□□□□ -1.93
CASC4-206ENST00000558847 NTN4Q9HB63 628 aa3□□□□□ -1.93
CASC4-206ENST00000558847 MRPS30Q9NP92 439 aaKnown RBP3□□□□□ -1.93
CASC4-206ENST00000558847 MTCH1Q9NZJ7 389 aa3□□□□□ -1.93
CASC4-206ENST00000558847 NYAP2Q9P242 653 aa3□□□□□ -1.93
CASC4-206ENST00000558847 CLN8Q9UBY8 286 aa3□□□□□ -1.93
CASC4-206ENST00000558847 ZNF629Q9UEG4 869 aaPredicted RBP3□□□□□ -1.93
CASC4-206ENST00000558847 TRAPPC4Q9Y296 219 aa3□□□□□ -1.93
CASC4-206ENST00000558847 CACNG2Q9Y698 323 aa3□□□□□ -1.93
CASC4-206ENST00000558847 F6UB75 175 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 SPECC1L-ADORA2AF8WAN1 911 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 L7N2F9 121 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 ZNF861PO60384 105 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 AIFM1O95831 613 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 MOSP00540 346 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 SERPINA5P05154 406 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 RALBP11234 206 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 MNAT1P51948 309 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 STXBP1P61764 594 aaKnown RBP2.99□□□□□ -1.93
CASC4-206ENST00000558847 NUTF2P61970 127 aaKnown RBP2.99□□□□□ -1.93
CASC4-206ENST00000558847 HMGCS1Q01581 520 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 PAX5Q02548 391 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 UNC119Q13432 240 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 MRPL23Q16540 153 aaKnown RBP2.99□□□□□ -1.93
CASC4-206ENST00000558847 ALKBH6Q3KRA9 238 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 PIGGQ5H8A4 983 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 LY6G6FQ5SQ64 297 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 SPESP1Q6UW49 350 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 ZNF621Q6ZSS3 439 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 HDDC2Q7Z4H3 204 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 TMCO2Q7Z6W1 182 aaPredicted RBP2.99□□□□□ -1.93
CASC4-206ENST00000558847 TMEM150AQ86TG1 271 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 TTC29Q8NA56 475 aaPredicted RBP2.99□□□□□ -1.93
CASC4-206ENST00000558847 OR2A1Q8NGT9 310 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 OR4S2Q8NH73 311 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 AGR3Q8TD06 166 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 ACTRT1Q8TDG2 376 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 RDH5Q92781 318 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 SEH1LQ96EE3 360 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 BPIFA3Q9BQP9 254 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 MRPL37Q9BZE1 423 aaKnown RBP2.99□□□□□ -1.93
CASC4-206ENST00000558847 DEC1Q9P2X7 70 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 CHD4Q14839 1912 aa2.99□□□□□ -1.93
CASC4-206ENST00000558847 WDR19Q8NEZ3 1342 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 ZNF816-ZNF321PA0A0X1KG74 233 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 WI2-2373I1.2A0A1W2PRP0 233 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 PES1O00541 588 aaKnown RBP2.98□□□□□ -1.93
CASC4-206ENST00000558847 TRAF3IP2O43734 574 aaPredicted RBP2.98□□□□□ -1.93
CASC4-206ENST00000558847 DNAJB6O75190 326 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 PLEKP08567 350 aaPredicted RBP2.98□□□□□ -1.93
CASC4-206ENST00000558847 STAG3L3P0CL85 134 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 OR8G3PP0DMU2 310 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 CT45A6P0DMU7 189 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 CT45A5P0DMU8 189 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 CT45A7P0DMV0 189 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 MGMTP16455 207 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 RCC1P18754 421 aaPredicted RBP2.98□□□□□ -1.93
CASC4-206ENST00000558847 WARSP23381 471 aaKnown RBP2.98□□□□□ -1.93
CASC4-206ENST00000558847 OMGP23515 440 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 HRH1P35367 487 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 NAMPTP43490 491 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 CYB561P49447 251 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 SELENBP1Q13228 472 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 MAB21L1Q13394 359 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 GUCA2BQ16661 112 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 TMEM183BQ1AE95 376 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 KRTAP13-3Q3SY46 172 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 CT45A1Q5HYN5 189 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 C1orf185Q5T7R7 199 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 STUMQ69YW2 141 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 TMEM220Q6QAJ8 160 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 TEX43Q6ZNM6 134 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 STRADAQ7RTN6 431 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 TMEM183AQ8IXX5 376 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 MKXQ8IYA7 352 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 KATNAL2Q8IYT4 538 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 OFCC1Q8IZS5 231 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 HSD17B11Q8NBQ5 300 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 MDS2Q8NDY4 140 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 CT45A3Q8NHU0 189 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 RNF138Q8WVD3 245 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 FAM3DQ96BQ1 224 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 JSRP1Q96MG2 331 aaPredicted RBP2.98□□□□□ -1.93
CASC4-206ENST00000558847 ELOVL6Q9H5J4 265 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 CCNB1IP1Q9NPC3 277 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 DMAP1Q9NPF5 467 aaPredicted RBP2.98□□□□□ -1.93
CASC4-206ENST00000558847 FAM49BQ9NUQ9 324 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 CD84Q9UIB8 345 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 KCNE3Q9Y6H6 103 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 CARMIL3Q8ND23 1372 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 CEMIPQ8WUJ3 1361 aa2.98□□□□□ -1.93
CASC4-206ENST00000558847 ADAMTS9Q9P2N4 1935 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 NFASCO94856 1347 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 IGLV11-55A0A075B6I3 123 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms