RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 P2RX4Q99571 388 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 BCL7BQ9BQE9 202 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 HDHD3Q9BSH5 251 aaPredicted RBP3.63□□□□□ -1.83
VRK1-205ENST00000555402 KCNJ16Q9NPI9 418 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 TDRD6O60522 2096 aaKnown RBP3.63□□□□□ -1.83
VRK1-205ENST00000555402 GLYATL1P3A0A0U1RQE8 302 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 ZNF816-ZNF321PA0A0X1KG74 233 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 PRSS37A4D1T9 235 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 HIDE1A8MVS5 230 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 PEX7O00628 323 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 KMOO15229 486 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 CASC3O15234 703 aaKnown RBP3.62□□□□□ -1.83
VRK1-205ENST00000555402 CLPXO76031 633 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 OR2F2O95006 317 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 PAHP00439 452 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 SERPINA5P05154 406 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 RHOXF2BP0C7M4 288 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 IGHV3-43DP0DP04 118 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 ZNF250P15622 560 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 LIPEQ05469 1076 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 SELENBP1Q13228 472 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 STK11Q15831 433 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 C2orf83Q53S99 150 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 CCNJQ5T5M9 372 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 TWF2Q6IBS0 349 aaKnown RBP3.62□□□□□ -1.83
VRK1-205ENST00000555402 CERS6Q6ZMG9 384 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 CAMK2N1Q7Z7J9 78 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 BIVMQ86UB2 503 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 OFCC1Q8IZS5 231 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 IL22RA2Q969J5 263 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 PRRC1Q96M27 445 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 OR5B12Q96R08 314 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 RHOXF2Q9BQY4 288 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 STMN4Q9H169 189 aaPredicted RBP3.62□□□□□ -1.83
VRK1-205ENST00000555402 ZNHIT6Q9NWK9 470 aaKnown RBP3.62□□□□□ -1.83
VRK1-205ENST00000555402 HRASLS2Q9NWW9 162 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 LYARQ9NX58 379 aaKnown RBP3.62□□□□□ -1.83
VRK1-205ENST00000555402 ZNF226Q9NYT6 803 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 ZMAT5Q9UDW3 170 aaKnown RBP3.62□□□□□ -1.83
VRK1-205ENST00000555402 NEU3Q9UQ49 428 aa3.62□□□□□ -1.83
VRK1-205ENST00000555402 LAD1O00515 517 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 MRPS12O15235 138 aaKnown RBP3.61□□□□□ -1.83
VRK1-205ENST00000555402 AIFM1O95831 613 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 ERCC1P07992 297 aaPredicted RBP3.61□□□□□ -1.83
VRK1-205ENST00000555402 ACSM4P0C7M7 580 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 FOLR1P15328 257 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 HMOX2P30519 316 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 DRD3P35462 400 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 NMUP48645 174 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 CKAP4Q07065 602 aaKnown RBP3.61□□□□□ -1.83
VRK1-205ENST00000555402 VAX1Q5SQQ9 334 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 AADACL4Q5VUY2 407 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 TMEM53Q6P2H8 277 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 LINC00173Q6ZV60 143 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 SSX9Q7RTT3 188 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 OAFQ86UD1 273 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 CMTM1Q8IZ96 169 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 IQCKQ8N0W5 287 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 GABRG1Q8N1C3 465 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 MNS1Q8NEH6 495 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 BPIFCQ8NFQ6 507 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 OR51G1Q8NGK1 321 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 OR10R2Q8NGX6 335 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 BLOC1S5Q8TDH9 187 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 RNF138Q8WVD3 245 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 TMEM158Q8WZ71 300 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 ECHDC3Q96DC8 303 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 SERPINB12Q96P63 405 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 DNTTIP1Q9H147 329 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 ABCB10Q9NRK6 738 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 C20orf96Q9NUD7 363 aaPredicted RBP3.61□□□□□ -1.83
VRK1-205ENST00000555402 GPATCH2LQ9NWQ4 482 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 TP53TG5Q9Y2B4 290 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 NFASCO94856 1347 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 CEMIPQ8WUJ3 1361 aa3.61□□□□□ -1.83
VRK1-205ENST00000555402 TRAV39A0A0B4J263 110 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 TEX46H3BTG2 121 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 NDUFAB1O14561 156 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 SPOPO43791 374 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 HUS1O60921 280 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 SUPT3HO75486 399 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 SLC25A27O95847 323 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 S100A9P06702 114 aaKnown RBP3.6□□□□□ -1.83
VRK1-205ENST00000555402 DUX4L4P0CJ87 422 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 STAG3L3P0CL85 134 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 OR8G3PP0DMU2 310 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 DCKP27707 260 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 RPS10P46783 165 aaKnown RBP3.6□□□□□ -1.83
VRK1-205ENST00000555402 EIF3EP60228 445 aaKnown RBP3.6□□□□□ -1.83
VRK1-205ENST00000555402 DOC2AQ14183 400 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 SF3A2Q15428 464 aaKnown RBP3.6□□□□□ -1.83
VRK1-205ENST00000555402 MPPED2Q15777 294 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 ZSCAN26Q16670 478 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 KCTD19Q17RG1 926 aaPredicted RBP3.6□□□□□ -1.83
VRK1-205ENST00000555402 C6orf120Q7Z4R8 191 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 TMCO2Q7Z6W1 182 aaPredicted RBP3.6□□□□□ -1.83
VRK1-205ENST00000555402 SCD5Q86SK9 330 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 ZNF429Q86V71 674 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 ZNF321PQ8N8H1 164 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 ACTRT1Q8TDG2 376 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms