RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 UBE2UQ5VVX9 321 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 VHLLQ6RSH7 139 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 FRRS1Q6ZNA5 592 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 AAED1Q7RTV5 226 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 ADCK1Q86TW2 530 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 GPAT4Q86UL3 456 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 PTOV1Q86YD1 416 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 CENPSQ8N2Z9 138 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 WDR31Q8NA23 367 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 FAM71CQ8NEG0 241 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 C1orf162Q8NEQ5 155 aaPredicted RBP7.72□□□□□ -1.17
TDP1-208ENST00000553989 OR6Q1Q8NGQ2 317 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 RHOXF1Q8NHV9 184 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 ITFG2Q969R8 447 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 LGALS12Q96DT0 336 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 C7orf34Q96L11 122 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 SLC35A5Q9BS91 424 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 GABARAPL3Q9BY60 117 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 MROQ9BYG7 248 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 NAA50Q9GZZ1 169 aaKnown RBP7.72□□□□□ -1.17
TDP1-208ENST00000553989 TMEM38AQ9H6F2 299 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 ZNF556Q9HAH1 456 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 SIAEQ9HAT2 523 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 SLC17A5Q9NRA2 495 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 POLE3Q9NRF9 147 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 SLC7A10Q9NS82 523 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 PAK1IP1Q9NWT1 392 aaPredicted RBP7.72□□□□□ -1.17
TDP1-208ENST00000553989 MOKQ9UQ07 419 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 POFUT2Q9Y2G5 429 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 TMED7Q9Y3B3 224 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 FAM32AQ9Y421 112 aaKnown RBP7.72□□□□□ -1.17
TDP1-208ENST00000553989 UGT2A1Q9Y4X1 527 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 FLVCR1Q9Y5Y0 555 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 MXRA5Q9NR99 2828 aa7.71□□□□□ -1.17
TDP1-208ENST00000553989 hCG_2014768A0A024R1R8 64 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 FUOMA2VDF0 154 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 NDUFS8O00217 210 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 AP3D1O14617 1153 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 HTR1AP08908 422 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 CD247P20963 164 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 TACR3P29371 465 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 MPGP29372 298 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 NTF4P34130 210 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 GGT2P36268 569 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 PPP5CP53041 499 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 GP2P55259 537 aaKnown RBP7.71□□□□□ -1.18
TDP1-208ENST00000553989 SMIM11AP58511 58 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 UBE2NP61088 152 aaKnown RBP7.71□□□□□ -1.18
TDP1-208ENST00000553989 GNA13Q14344 377 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 SPCS2Q15005 226 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 OR7A5Q15622 319 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 MICAQ29983 383 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 HIKESHIQ53FT3 197 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 FAM120AOSQ5T036 256 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 GCNT6Q5T4J0 391 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 SLC16A12Q6ZSM3 486 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 ABHD12BQ7Z5M8 362 aaPredicted RBP7.71□□□□□ -1.18
TDP1-208ENST00000553989 LSRQ86X29 649 aaPredicted RBP7.71□□□□□ -1.18
TDP1-208ENST00000553989 ADGRG3Q86Y34 549 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 ARMC8Q8IUR7 673 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 HS3ST5Q8IZT8 346 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 ZBTB8BQ8NAP8 495 aaPredicted RBP7.71□□□□□ -1.18
TDP1-208ENST00000553989 OIT3Q8WWZ8 545 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 PMM1Q92871 262 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 Q96MT0 163 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 SORCS2Q96PQ0 1159 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 DGCR6LQ9BY27 220 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 RACGAP1Q9H0H5 632 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 ACOT13Q9NPJ3 140 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 EXOSC3Q9NQT5 275 aaKnown RBP7.71□□□□□ -1.18
TDP1-208ENST00000553989 SLC6A13Q9NSD5 602 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 RHBDL2Q9NX52 303 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 THUMPD1Q9NXG2 353 aaKnown RBP7.71□□□□□ -1.18
TDP1-208ENST00000553989 OSGIN1Q9UJX0 560 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 TRAPPC4Q9Y296 219 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 U3KQV3 271 aa7.71□□□□□ -1.18
TDP1-208ENST00000553989 NUP214P35658 2090 aaPredicted RBP7.71□□□□□ -1.18
TDP1-208ENST00000553989 PNMA8CA0A1B0GUJ8 204 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 LOC390937A0A1W2PQ73 354 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 SLC35F4A4IF30 521 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 ARRDC5A6NEK1 342 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 EFCAB10A6NFE3 127 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 ZNF587BE7ETH6 402 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 ZNF208O43345 1280 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 MITFO75030 526 aaPredicted RBP7.7□□□□□ -1.18
TDP1-208ENST00000553989 AKR7A3O95154 331 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 TGFAP01135 160 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 CRYAAP02489 173 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 ERCC1P07992 297 aaPredicted RBP7.7□□□□□ -1.18
TDP1-208ENST00000553989 CXCR1P25024 350 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 RRM2P31350 389 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 SERPINF1P36955 418 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 NR4A2P43354 598 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 ANXA11P50995 505 aaKnown RBP7.7□□□□□ -1.18
TDP1-208ENST00000553989 PSMD7P51665 324 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 IL1RL1Q01638 556 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 FUT5Q11128 374 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 SLC17A1Q14916 467 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 OXA1LQ15070 435 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 TIMM50Q3ZCQ8 353 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms