RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 MMP7P09237 267 aaPredicted RBP12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 ZFP36P26651 326 aaKnown RBP12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 STOMP27105 288 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 MMP15P51511 669 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 TUSC1Q2TAM9 212 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 MIDNQ504T8 468 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 PABPC1L2AQ5JQF8 200 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 SPATA46Q5T0L3 261 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 NANOGNBQ7Z5D8 188 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 MSRB3Q8IXL7 192 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 C1orf174Q8IYL3 243 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 LRRC18Q8N456 261 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 SPICQ8N5J4 248 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 SYT14Q8NB59 555 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 HIPK4Q8NE63 616 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 DEFB108BQ8NET1 73 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 IPCEF1Q8WWN9 437 aaPredicted RBP12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 MCHR2Q969V1 340 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 OR52B2Q96RD2 323 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 MRI1Q9BV20 369 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 C1QTNF5Q9BXJ0 243 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 CCNB1IP1Q9NPC3 277 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 ZNF69Q9UC07 566 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 LEF1Q9UJU2 399 aaPredicted RBP12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 ZDHHC8Q9ULC8 765 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 ANGPT4Q9Y264 503 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 A0A1W2PRG6 482 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 C5orf49A4QMS7 147 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 EVPLLA8MZ36 301 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 CENPBD1B2RD01 187 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 MCIDASD6RGH6 385 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 CLDN34H7C241 214 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 KPNA4O00629 521 aaPredicted RBP12□□□□□ -0.49
CHMP1A-210ENST00000551981 ADH4P08319 380 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 UMPSP11172 480 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 GDI2P50395 445 aaKnown RBP12□□□□□ -0.49
CHMP1A-210ENST00000551981 ZNF154Q13106 437 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 HIST3H3Q16695 136 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 THEM4Q5T1C6 240 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 MBNL2Q5VZF2 373 aaKnown RBP12□□□□□ -0.49
CHMP1A-210ENST00000551981 WDR93Q6P2C0 686 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 C10orf111Q8N326 155 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 KLHL36Q8N4N3 616 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 NOXO1Q8NFA2 376 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 MARS2Q96GW9 593 aaKnown RBP12□□□□□ -0.49
CHMP1A-210ENST00000551981 ZNF347Q96SE7 839 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 WFDC6Q9BQY6 131 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 SLC19A3Q9BZV2 496 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 SLITRK2Q9H156 845 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 SIAEQ9HAT2 523 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 NPTNQ9Y639 398 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 GMEB1Q9Y692 573 aa12□□□□□ -0.49
CHMP1A-210ENST00000551981 A0A0G2JK05 382 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 ZSCAN5BA6NJL1 495 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 CPSF4LA6NMK7 179 aaKnown RBP11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 H3BSA7 217 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 M0R3H8 397 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 CD55P08174 381 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 SBK2P0C263 348 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 MPV17P39210 176 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 WNT5AP41221 380 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 WDR4P57081 412 aaKnown RBP11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 TNFAIP8L3Q5GJ75 292 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 ENTPD8Q5MY95 495 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 MAVSQ7Z434 540 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 CROCCP2Q86T23 111 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 ZNF101Q8IZC7 436 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 SMYD1Q8NB12 490 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 SLC25A40Q8TBP6 338 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 KLF14Q8TD94 323 aaPredicted RBP11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 GEMIN6Q8WXD5 167 aaKnown RBP11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 MPP4Q96JB8 637 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 ARHGDIGQ99819 225 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 MS4A7Q9GZW8 240 aaPredicted RBP11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 MMP26Q9NRE1 261 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 SLAMF8Q9P0V8 285 aa11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 STX18Q9P2W9 335 aaKnown RBP11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 POLR3KQ9Y2Y1 108 aaPredicted RBP11.99□□□□□ -0.49
CHMP1A-210ENST00000551981 TMEM120BA0PK00 339 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 BLOC1S5-TXNDC5H3BN57 136 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 IGHV2-70P01814 119 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 ASAH2BP0C7U1 165 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 ZNF12P17014 697 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 ZNF32P17041 273 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 GPX2P18283 190 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 TNFSF4P23510 183 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 MTNR1AP48039 350 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 MRPL19P49406 292 aaKnown RBP11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 DAP3P51398 398 aaKnown RBP11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 MRPS34P82930 218 aaKnown RBP11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 KLF17Q5JT82 389 aaPredicted RBP11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 C10orf128Q5T292 105 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 BLOC1S3Q6QNY0 202 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 ZER1Q7Z7L7 766 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 ALDH16A1Q8IZ83 802 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 BCL6BQ8N143 479 aaPredicted RBP11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 OR6T1Q8NGN1 323 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 ABHD4Q8TB40 342 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 ADAMTS16Q8TE57 1224 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 SPDL1Q96EA4 605 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms