RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 DHFRP00374 187 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 CD14P08571 375 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 FAM157BP0CG42 384 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 PRR23D2P0DMB1 279 aaPredicted RBP7.95□□□□□ -1.14
DDB1-213ENST00000539332 GALP22466 123 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 NOS3P29474 1203 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 FOXF1Q12946 379 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 TPBGQ13641 420 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 CRMP1Q14194 572 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 GGTLC2Q14390 218 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 SGCBQ16585 318 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 C1orf140Q5VVS0 124 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 ARSKQ6UWY0 536 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 MEPCEQ7L2J0 689 aaKnown RBP7.95□□□□□ -1.14
DDB1-213ENST00000539332 WDSUB1Q8N9V3 476 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 NPEPL1Q8NDH3 523 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 ATP6V1C2Q8NEY4 427 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 MOSPD2Q8NHP6 518 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 UFD1Q92890 307 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 SGCZQ96LD1 299 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 ERMAPQ96PL5 475 aaPredicted RBP7.95□□□□□ -1.14
DDB1-213ENST00000539332 NPAS1Q99742 590 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 PPA2Q9H2U2 334 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 CLEC4MQ9H2X3 399 aaPredicted RBP7.95□□□□□ -1.14
DDB1-213ENST00000539332 CCDC86Q9H6F5 360 aaKnown RBP7.95□□□□□ -1.14
DDB1-213ENST00000539332 PPP1R3EQ9H7J1 279 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 HPF1Q9NWY4 346 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 ANKRD10Q9NXR5 420 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 MED11Q9P086 117 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 CLEC2DQ9UHP7 191 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 IER3IP1Q9Y5U9 82 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 FKBP7Q9Y680 259 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 DNAJC13O75165 2243 aa7.95□□□□□ -1.14
DDB1-213ENST00000539332 FAM183AA6NL82 134 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 OR2T1O43869 369 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 IGHMP01871 453 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 RAF1P04049 648 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 LIMS3P0CW19 117 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 LIMS4P0CW20 117 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 CCL3P10147 92 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 HIST1H1CP16403 213 aaKnown RBP7.94□□□□□ -1.14
DDB1-213ENST00000539332 STOMP27105 288 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 SDHAP31040 664 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 GABRA5P31644 462 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 EIF2S3P41091 472 aaKnown RBP7.94□□□□□ -1.14
DDB1-213ENST00000539332 AQP2P41181 271 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 CYB561P49447 251 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 ETV1P50549 477 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 HSF2Q03933 536 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 RPL18Q07020 188 aaKnown RBP7.94□□□□□ -1.14
DDB1-213ENST00000539332 DEFB109BQ30KR1 87 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 GXYLT1Q4G148 440 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 EMC4Q5J8M3 183 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 C1QL3Q5VWW1 255 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 PAMR1Q6UXH9 720 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 MAMDC2Q7Z304 686 aaPredicted RBP7.94□□□□□ -1.14
DDB1-213ENST00000539332 MDGA2Q7Z553 956 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 ZNF227Q86WZ6 799 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 SPACA3Q8IXA5 215 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 EXD3Q8N9H8 876 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 ZNF680Q8NEM1 530 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 OR5J2Q8NH18 312 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 POC1BQ8TC44 478 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 ZNF431Q8TF32 576 aaPredicted RBP7.94□□□□□ -1.14
DDB1-213ENST00000539332 C1GALT1C1Q96EU7 318 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 KATNB1Q9BVA0 655 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 HDHD5Q9BXW7 423 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 POTEKPQ9BYX7 375 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 MED28Q9H204 178 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 MED20Q9H944 212 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 FANCFQ9NPI8 374 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 SLC23A1Q9UHI7 598 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 GLS2Q9UI32 602 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 ADAM18Q9Y3Q7 739 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 TNRC6AQ8NDV7 1962 aaKnown RBP7.94□□□□□ -1.14
DDB1-213ENST00000539332 A0A087WZY1 265 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 TRDV1A0A1B0GX56 115 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 AKR7A2O43488 359 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 EFNA2O43921 213 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 GMFGO60234 142 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 SLC25A12O75746 678 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 AHSA1O95433 338 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 F10P00742 488 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 ANXA3P12429 323 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 PAICSP22234 425 aaKnown RBP7.94□□□□□ -1.14
DDB1-213ENST00000539332 ADH6P28332 368 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 ZNF41P51814 821 aaPredicted RBP7.94□□□□□ -1.14
DDB1-213ENST00000539332 SLC25A1P53007 311 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 WNT4P56705 351 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 OC90Q02509 493 aaPredicted RBP7.94□□□□□ -1.14
DDB1-213ENST00000539332 ACSM1Q08AH1 577 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 MFSD13AQ14CX5 517 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 ALG10Q5BKT4 473 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 PRAMEF20Q5VT98 475 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 LIPKQ5VXJ0 399 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 CD276Q5ZPR3 534 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 SLC22A10Q63ZE4 541 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 GPR139Q6DWJ6 353 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 OR5M10Q6IEU7 315 aa7.94□□□□□ -1.14
DDB1-213ENST00000539332 CNIH2Q6PI25 160 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms