RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 AKIP1Q9NQ31 210 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 DAPK2Q9UIK4 370 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 COPS3Q9UNS2 423 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 CACNA1BQ00975 2339 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 A0A1B0GTH9 108 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 A0A1B0GVC2 190 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 J3QLW9 94 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 ZNF19P17023 458 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 RUNX1T1Q06455 604 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 ACSM1Q08AH1 577 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 BCL2A1Q16548 175 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 TMEM225Q6GV28 225 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 PLXDC2Q6UX71 529 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 GPAT4Q86UL3 456 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 TMED9Q9BVK6 235 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 TXNIPQ9H3M7 391 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 PLSCR2Q9NRY7 297 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 BABAM2Q9NXR7 383 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 NPIPA2E9PIF3 369 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 NPIPA3F8WFD2 350 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 XKRYO14609 159 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 GPANK1O95872 356 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 RENP00797 406 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 TUBA1BP68363 451 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 FABP5Q01469 135 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 C22orf42Q6IC83 251 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 TUBA1AQ71U36 451 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 WDFY1Q8IWB7 410 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 WDYHV1Q96HA8 205 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 HMG20AQ9NP66 347 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 TXNL4BQ9NX01 149 aaKnown RBP16.46■□□□□ 0.23
SMPD1-208ENST00000533123 SSR3Q9UNL2 185 aa16.46■□□□□ 0.23
SMPD1-208ENST00000533123 RP1L1Q8IWN7 2480 aaPredicted RBP16.45■□□□□ 0.22
SMPD1-208ENST00000533123 AQP7P3A6NL99 342 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 EIF1BO60739 113 aaKnown RBP16.45■□□□□ 0.22
SMPD1-208ENST00000533123 OR2T7P0C7T2 308 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 GABRA5P31644 462 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 EIF2B2P49770 351 aaKnown RBP16.45■□□□□ 0.22
SMPD1-208ENST00000533123 INSL4Q14641 139 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 TP53I3Q53FA7 332 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 PDSS1Q5T2R2 415 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 RPTNQ6XPR3 784 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 OR2T27Q8NH04 317 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 ROBO4Q8WZ75 1007 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 NUAK2Q9H093 628 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 KLHL13Q9P2N7 655 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 B3GAT1Q9P2W7 334 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 CAMK2AQ9UQM7 478 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 EPG5Q9HCE0 2579 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 KIAA1549Q9HCM3 1950 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 GTF3C1Q12789 2109 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 TVP23AA6NH52 213 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 AQP7O14520 342 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 SMAD9O15198 467 aaKnown RBP16.45■□□□□ 0.22
SMPD1-208ENST00000533123 MT-ND5P03915 603 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 CPN1P15169 458 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 AGFG1P52594 562 aaKnown RBP16.45■□□□□ 0.22
SMPD1-208ENST00000533123 ZP4Q12836 540 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 OTPQ5XKR4 325 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 GDPGP1Q6ZNW5 385 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 OR2T4Q8NH00 348 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 FOXN4Q96NZ1 517 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 WDR12Q9GZL7 423 aaKnown RBP16.45■□□□□ 0.22
SMPD1-208ENST00000533123 TIGARQ9NQ88 270 aa16.45■□□□□ 0.22
SMPD1-208ENST00000533123 A0A1W2PRG6 482 aa16.44■□□□□ 0.22
SMPD1-208ENST00000533123 PRSS37A4D1T9 235 aa16.44■□□□□ 0.22
SMPD1-208ENST00000533123 IGHMP01871 453 aa16.44■□□□□ 0.22
SMPD1-208ENST00000533123 IFNGR1P15260 489 aa16.44■□□□□ 0.22
SMPD1-208ENST00000533123 IFITM3Q01628 133 aa16.44■□□□□ 0.22
SMPD1-208ENST00000533123 POU3F1Q03052 451 aaPredicted RBP16.44■□□□□ 0.22
SMPD1-208ENST00000533123 PRR30Q53SZ7 412 aaPredicted RBP16.44■□□□□ 0.22
SMPD1-208ENST00000533123 VASH1Q7L8A9 365 aaPredicted RBP16.44■□□□□ 0.22
SMPD1-208ENST00000533123 SYT14Q8NB59 555 aa16.44■□□□□ 0.22
SMPD1-208ENST00000533123 ADPRHL1Q8NDY3 354 aa16.44■□□□□ 0.22
SMPD1-208ENST00000533123 MCFD2Q8NI22 146 aa16.44■□□□□ 0.22
SMPD1-208ENST00000533123 CPNE4Q96A23 557 aaPredicted RBP16.44■□□□□ 0.22
SMPD1-208ENST00000533123 SNRNP40Q96DI7 357 aaKnown RBP16.44■□□□□ 0.22
SMPD1-208ENST00000533123 GPR137Q96N19 417 aa16.44■□□□□ 0.22
SMPD1-208ENST00000533123 NAA11Q9BSU3 229 aaPredicted RBP16.44■□□□□ 0.22
SMPD1-208ENST00000533123 TRIM36Q9NQ86 728 aa16.44■□□□□ 0.22
SMPD1-208ENST00000533123 GRIP1Q9Y3R0 1128 aa16.44■□□□□ 0.22
SMPD1-208ENST00000533123 NOX1Q9Y5S8 564 aa16.44■□□□□ 0.22
SMPD1-208ENST00000533123 METTL15A6NJ78 407 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 ZNF670-ZNF695F2Z2N8 137 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 DNPH1O43598 174 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 KLRB1Q12918 225 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 ZNF239Q16600 458 aaKnown RBP16.43■□□□□ 0.22
SMPD1-208ENST00000533123 EEF1A1P5Q5VTE0 462 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 ZNF324BQ6AW86 544 aaPredicted RBP16.43■□□□□ 0.22
SMPD1-208ENST00000533123 PCSK4Q6UW60 755 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 PXKQ7Z7A4 578 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 CDADC1Q9BWV3 514 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 HDHD5Q9BXW7 423 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 MED29Q9NX70 200 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 MOKQ9UQ07 419 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 SMG1Q96Q15 3661 aaKnown RBP16.43■□□□□ 0.22
SMPD1-208ENST00000533123 A0A1W2PNV4 684 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 PRR32B1ATL7 298 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 ERVH48-1M5A8F1 160 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 RPS19P39019 145 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms