RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 CPPED1Q9BRF8 314 aaPredicted RBP10.58□□□□□ -0.72
CAPN1-223ENST00000533079 C1orf198Q9H425 327 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 ARMC7Q9H6L4 198 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 SAP30LQ9HAJ7 183 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 C12orf10Q9HB07 376 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 RLIMQ9NVW2 624 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 ZNF224Q9NZL3 707 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 TAAR3PQ9P1P4 343 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 FZR1Q9UM11 496 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 CORO2BQ9UQ03 480 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 FAM220BPB1ANY3 271 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 M0R3G1 203 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 ARPC2O15144 300 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 GMNNO75496 209 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 FOXH1O75593 365 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 CPSF4O95639 269 aaKnown RBP10.57□□□□□ -0.72
CAPN1-223ENST00000533079 SNAP29O95721 258 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 BAG2O95816 211 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 SERPINA5P05154 406 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 GKN3PP0CG01 181 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 ZNF250P15622 560 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 GIPRP48546 466 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 RAB1AP62820 205 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 EGR4Q05215 589 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 PIGFQ07326 219 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 SLC3A1Q07837 685 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 MFSD13AQ14CX5 517 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 LARS2Q15031 903 aaKnown RBP10.57□□□□□ -0.72
CAPN1-223ENST00000533079 GLYATQ6IB77 296 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 ERICH5Q6P6B1 374 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 FKBP9P1Q75LS8 142 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 WDFY1Q8IWB7 410 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 C20orf196Q8IYI0 205 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 KDM8Q8N371 416 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 CPEB3Q8NE35 698 aaKnown RBP10.57□□□□□ -0.72
CAPN1-223ENST00000533079 OR2T12Q8NG77 320 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 OR52P1PQ8NH57 321 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 PNPT1Q8TCS8 783 aaKnown RBP10.57□□□□□ -0.72
CAPN1-223ENST00000533079 ST7LQ8TDW4 575 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 SLC38A4Q969I6 547 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 ELMOD3Q96FG2 381 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 RSRC1Q96IZ7 334 aaKnown RBP10.57□□□□□ -0.72
CAPN1-223ENST00000533079 C1orf147Q96MC9 270 aaPredicted RBP10.57□□□□□ -0.72
CAPN1-223ENST00000533079 PANX1Q96RD7 426 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 FOXB1Q99853 325 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 MMP27Q9H306 513 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 CACYBPQ9HB71 228 aaKnown RBP10.57□□□□□ -0.72
CAPN1-223ENST00000533079 DECR2Q9NUI1 292 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 P2RX2Q9UBL9 471 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.57□□□□□ -0.72
CAPN1-223ENST00000533079 ZNF443Q9Y2A4 671 aaPredicted RBP10.57□□□□□ -0.72
CAPN1-223ENST00000533079 POFUT2Q9Y2G5 429 aa10.57□□□□□ -0.72
CAPN1-223ENST00000533079 TCRBV5S2A0A599 114 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 ELOVL7A1L3X0 281 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 H0YJX3 145 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 M0R082 166 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 CLIC1O00299 241 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 FCGR1AP12314 374 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 B4GALT1P15291 398 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 CRISP3P54108 245 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 MTPNP58546 118 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 SELPLGQ14242 412 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 OGFRL1Q5TC84 451 aaPredicted RBP10.56□□□□□ -0.72
CAPN1-223ENST00000533079 USP51Q70EK9 711 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 H1FNTQ75WM6 255 aaPredicted RBP10.56□□□□□ -0.72
CAPN1-223ENST00000533079 DPPA2Q7Z7J5 298 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 LSRQ86X29 649 aaPredicted RBP10.56□□□□□ -0.72
CAPN1-223ENST00000533079 ZNF584Q8IVC4 421 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 UEVLDQ8IX04 471 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 HIPK4Q8NE63 616 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 DEFB108BQ8NET1 73 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 ZNF417Q8TAU3 575 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 ZNF519Q8TB69 540 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 SYNPRQ8TBG9 265 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 SLCO4A1Q96BD0 722 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 ZNF587Q96SQ5 575 aaPredicted RBP10.56□□□□□ -0.72
CAPN1-223ENST00000533079 ULBP2Q9BZM5 246 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 BCL2L14Q9BZR8 327 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 SEC14L4Q9UDX3 406 aa10.56□□□□□ -0.72
CAPN1-223ENST00000533079 TESQ9UGI8 421 aaKnown RBP10.56□□□□□ -0.72
CAPN1-223ENST00000533079 POLR3KQ9Y2Y1 108 aaPredicted RBP10.56□□□□□ -0.72
CAPN1-223ENST00000533079 DHRS12A0PJE2 317 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 M0QZ24 198 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 TPD52L2O43399 206 aaKnown RBP10.55□□□□□ -0.72
CAPN1-223ENST00000533079 BMP2P12643 396 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 ATP6V1B2P21281 511 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 MTNR1AP48039 350 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 LCN2P80188 198 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 RBBP4Q09028 425 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 ALKBH6Q3KRA9 238 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 PHYHD1Q5SRE7 291 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 ZNF362Q5T0B9 420 aaPredicted RBP10.55□□□□□ -0.72
CAPN1-223ENST00000533079 ZNF621Q6ZSS3 439 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 PIWIL3Q7Z3Z3 882 aaKnown RBP10.55□□□□□ -0.72
CAPN1-223ENST00000533079 VRK2Q86Y07 508 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 MICU2Q8IYU8 434 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 ADGRG5Q8IZF4 528 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 SCAIQ8N9R8 606 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 SLC30A7Q8NEW0 376 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 OR6S1Q8NH40 331 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms