RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 TMCO2Q7Z6W1 182 aaPredicted RBP5.29□□□□□ -1.56
CD44-225ENST00000527326 ATG4DQ86TL0 474 aaPredicted RBP5.29□□□□□ -1.56
CD44-225ENST00000527326 NR2C2APQ86WQ0 139 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 WDFY1Q8IWB7 410 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 MRPL41Q8IXM3 137 aaKnown RBP5.29□□□□□ -1.56
CD44-225ENST00000527326 C1orf87Q8N0U7 546 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 MUC20Q8N307 709 aaPredicted RBP5.29□□□□□ -1.56
CD44-225ENST00000527326 SLC35G3Q8N808 338 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 PLPP5Q8NEB5 264 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 OR51G2Q8NGK0 314 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 OR52B4Q8NGK2 314 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 OR5D18Q8NGL1 313 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 OR52J3Q8NH60 311 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 OR14L1PQ8NHC6 308 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 CPT1CQ8TCG5 803 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 ADAMTS17Q8TE56 1095 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 LIPHQ8WWY8 451 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 PIGBQ92521 554 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 PPCDCQ96CD2 204 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 RAB39BQ96DA2 213 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 TECTBQ96PL2 329 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 SMOQ99835 787 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 AIF1LQ9BQI0 150 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 TRMT61BQ9BVS5 477 aaKnown RBP5.29□□□□□ -1.56
CD44-225ENST00000527326 GPR87Q9BY21 358 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 MRPL13Q9BYD1 178 aaKnown RBP5.29□□□□□ -1.56
CD44-225ENST00000527326 SMDT1Q9H4I9 107 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 AUNIPQ9H7T9 357 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 ZNF430Q9H8G1 570 aaPredicted RBP5.29□□□□□ -1.56
CD44-225ENST00000527326 RDH14Q9HBH5 336 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 CSNK1G1Q9HCP0 422 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 APMAPQ9HDC9 416 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 MYOZ2Q9NPC6 264 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 MRPL17Q9NRX2 175 aaKnown RBP5.29□□□□□ -1.56
CD44-225ENST00000527326 SLC6A13Q9NSD5 602 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 SEMA5BQ9P283 1151 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 NCDNQ9UBB6 729 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 ZNF282Q9UDV7 671 aaPredicted RBP5.29□□□□□ -1.56
CD44-225ENST00000527326 SLC2A6Q9UGQ3 507 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 VAX2Q9UIW0 290 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 GPR34Q9UPC5 381 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 RNF24Q9Y225 148 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 CLDN16Q9Y5I7 305 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 TMEM272A0A1B0GTI8 110 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 A0A1B0GVC2 190 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 TVP23AA6NH52 213 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 A6NIN4 97 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 TSPAN6O43657 245 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 TLX2O43763 284 aaPredicted RBP5.28□□□□□ -1.56
CD44-225ENST00000527326 PCDH7O60245 1069 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 TOMM40O96008 361 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 FGBP02675 491 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 GBAP04062 536 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 CEACAM5P06731 702 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 EPHX1P07099 455 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 RAB40ALP0C0E4 278 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 TRGC1P0CF51 173 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 GSTM3P21266 225 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 PCSK1P29120 753 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 ADRA1AP35348 466 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 APLNRP35414 380 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 KIR3DL1P43629 444 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 SULT1A2P50226 295 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 FGF8P55075 233 aaPredicted RBP5.28□□□□□ -1.56
CD44-225ENST00000527326 UBE2G2P60604 165 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 H3F3AP84243 136 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 OC90Q02509 493 aaPredicted RBP5.28□□□□□ -1.56
CD44-225ENST00000527326 PAX5Q02548 391 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 ZNF616Q08AN1 781 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 SLC10A7Q0GE19 358 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 UBE2V1Q13404 147 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 ENPP2Q13822 863 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 RUNX2Q13950 521 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 ABRAXAS2Q15018 415 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 TAF9Q16594 264 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 ALG10BQ5I7T1 473 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 CRB2Q5IJ48 1285 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 COA6Q5JTJ3 125 aaKnown RBP5.28□□□□□ -1.56
CD44-225ENST00000527326 LY6G6FQ5SQ64 297 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 SUSD4Q5VX71 490 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 TMEM268Q5VZI3 342 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 MRNIPQ6NTE8 343 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 TNFAIP8L2Q6P589 184 aaPredicted RBP5.28□□□□□ -1.56
CD44-225ENST00000527326 KIRREL2Q6UWL6 708 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 ERN2Q76MJ5 926 aaKnown RBP5.28□□□□□ -1.56
CD44-225ENST00000527326 TMPRSS7Q7RTY8 843 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 LINC01551Q86U37 167 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 PIM3Q86V86 326 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 KRTCAP2Q8N6L1 136 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 C12orf76Q8N812 135 aaPredicted RBP5.28□□□□□ -1.56
CD44-225ENST00000527326 FRMD1Q8N878 549 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 ZFP41Q8N8Y5 198 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 C17orf47Q8NEP4 570 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 STEAP2Q8NFT2 490 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 OR4E2Q8NGC2 313 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 OR14K1Q8NGZ2 314 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 OR2L2Q8NH16 312 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 OR51A7Q8NH64 312 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 OR52I2Q8NH67 350 aa5.28□□□□□ -1.56
CD44-225ENST00000527326 GRHL3Q8TE85 626 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms