RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 ENTPD8Q5MY95 495 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 EPGNQ6UW88 154 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 SPDL1Q96EA4 605 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 ZNF347Q96SE7 839 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 ARHGDIGQ99819 225 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 TRIM33Q9UPN9 1127 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 USH1CQ9Y6N9 552 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 UBOX5O94941 541 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 LYPD3O95274 346 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 THY1P04216 161 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 ASAH2BP0C7U1 165 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 CCNOP22674 350 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 GCH1P30793 250 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 MMP15P51511 669 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 HSF2Q03933 536 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 TUSC1Q2TAM9 212 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 THEM4Q5T1C6 240 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 DOK3Q7L591 496 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 LRRC18Q8N456 261 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 SIGLECL1Q8N7X8 197 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 CPEB3Q8NE35 698 aaKnown RBP13.65□□□□□ -0.22
PTPRU-210ENST00000527027 OR6T1Q8NGN1 323 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 ST7LQ8TDW4 575 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 MRPL13Q9BYD1 178 aaKnown RBP13.65□□□□□ -0.22
PTPRU-210ENST00000527027 SLC19A3Q9BZV2 496 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 EGLN1Q9GZT9 426 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 KCNN2Q9H2S1 579 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 SIAEQ9HAT2 523 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 UBAP1Q9NZ09 502 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 CCDC167Q9P0B6 97 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 EIF3KQ9UBQ5 218 aaKnown RBP13.65□□□□□ -0.22
PTPRU-210ENST00000527027 ANGPT4Q9Y264 503 aa13.65□□□□□ -0.22
PTPRU-210ENST00000527027 PLSCR5A0PG75 271 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 ISPDA4D126 451 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 CPSF4LA6NMK7 179 aaKnown RBP13.64□□□□□ -0.23
PTPRU-210ENST00000527027 CENPBD1B2RD01 187 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 M0QX08 132 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 ADH4P08319 380 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 UMPSP11172 480 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 PRTN3P24158 256 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 STOMP27105 288 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 PCBP3P57721 371 aaKnown RBP13.64□□□□□ -0.23
PTPRU-210ENST00000527027 NPTX1Q15818 432 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 PABPC1L2AQ5JQF8 200 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 UNQ6126/PRO20091Q6UXV3 157 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 ZNF771Q7L3S4 317 aaPredicted RBP13.64□□□□□ -0.23
PTPRU-210ENST00000527027 NANOGNBQ7Z5D8 188 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 RBM45Q8IUH3 476 aaKnown RBP13.64□□□□□ -0.23
PTPRU-210ENST00000527027 SYT14Q8NB59 555 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 GPR32P1Q8NGA4 272 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 ADAMTS16Q8TE57 1224 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 POP5Q969H6 163 aaKnown RBP13.64□□□□□ -0.23
PTPRU-210ENST00000527027 LRRC58Q96CX6 371 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 MARS2Q96GW9 593 aaKnown RBP13.64□□□□□ -0.23
PTPRU-210ENST00000527027 MPP4Q96JB8 637 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 POM121L2Q96KW2 1035 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 SEPHS2Q99611 448 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 GPA33Q99795 319 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 CYSLTR2Q9NS75 346 aa13.64□□□□□ -0.23
PTPRU-210ENST00000527027 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.64□□□□□ -0.23
PTPRU-210ENST00000527027 LEF1Q9UJU2 399 aaPredicted RBP13.64□□□□□ -0.23
PTPRU-210ENST00000527027 A0A1W2PRG6 482 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 TRAPPC13A5PLN9 417 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 BLOC1S5-TXNDC5H3BN57 136 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 KPNA4O00629 521 aaPredicted RBP13.63□□□□□ -0.23
PTPRU-210ENST00000527027 POLR3GO15318 223 aaPredicted RBP13.63□□□□□ -0.23
PTPRU-210ENST00000527027 FOXH1O75593 365 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 ZFP36P26651 326 aaKnown RBP13.63□□□□□ -0.23
PTPRU-210ENST00000527027 LIPAP38571 399 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 MPV17P39210 176 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 WNT5AP41221 380 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 ZNF133P52736 654 aaPredicted RBP13.63□□□□□ -0.23
PTPRU-210ENST00000527027 MRPS34P82930 218 aaKnown RBP13.63□□□□□ -0.23
PTPRU-210ENST00000527027 TTMPQ5BVD1 217 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 TMEM255AQ5JRV8 349 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 SPATA46Q5T0L3 261 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 MBNL2Q5VZF2 373 aaKnown RBP13.63□□□□□ -0.23
PTPRU-210ENST00000527027 PTOV1Q86YD1 416 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 ZNF101Q8IZC7 436 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 C11orf65Q8NCR3 313 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 DEFB108BQ8NET1 73 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 IPCEF1Q8WWN9 437 aaPredicted RBP13.63□□□□□ -0.23
PTPRU-210ENST00000527027 ZNF426Q9BUY5 554 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 CCNB1IP1Q9NPC3 277 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 NUP50Q9UKX7 468 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 SLC7A7Q9UM01 511 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 ARHGAP32A7KAX9 2087 aa13.63□□□□□ -0.23
PTPRU-210ENST00000527027 C5orf49A4QMS7 147 aa13.62□□□□□ -0.23
PTPRU-210ENST00000527027 ZSCAN5BA6NJL1 495 aa13.62□□□□□ -0.23
PTPRU-210ENST00000527027 MCIDASD6RGH6 385 aa13.62□□□□□ -0.23
PTPRU-210ENST00000527027 TRMUO75648 421 aaKnown RBP13.62□□□□□ -0.23
PTPRU-210ENST00000527027 TGDSO95455 350 aa13.62□□□□□ -0.23
PTPRU-210ENST00000527027 OPN1SWP03999 348 aa13.62□□□□□ -0.23
PTPRU-210ENST00000527027 ACADSP16219 412 aa13.62□□□□□ -0.23
PTPRU-210ENST00000527027 ZNF32P17041 273 aa13.62□□□□□ -0.23
PTPRU-210ENST00000527027 ATP4BP51164 291 aa13.62□□□□□ -0.23
PTPRU-210ENST00000527027 UGT2B15P54855 530 aa13.62□□□□□ -0.23
PTPRU-210ENST00000527027 PDLIM3Q53GG5 364 aaPredicted RBP13.62□□□□□ -0.23
PTPRU-210ENST00000527027 RUNDC3AQ59EK9 446 aa13.62□□□□□ -0.23
PTPRU-210ENST00000527027 C10orf128Q5T292 105 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms