RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 C9orf135Q5VTT2 229 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 TMEM71Q6P5X7 295 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 CCDC74AQ96AQ1 378 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 ELF4Q99607 663 aaPredicted RBP12.04□□□□□ -0.48
TCOF1-213ENST00000514442 APMAPQ9HDC9 416 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 OR51B4Q9Y5P0 310 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 ETV7Q9Y603 341 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 ARFGEF1Q9Y6D6 1849 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 PRKNO60260 465 aaPredicted RBP12.04□□□□□ -0.48
TCOF1-213ENST00000514442 NME2P22392 152 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 SERPINF1P36955 418 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 ALDH3B1P43353 468 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 CSNK1A1P48729 337 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 TMEM176BQ3YBM2 270 aaPredicted RBP12.04□□□□□ -0.48
TCOF1-213ENST00000514442 DCAF12Q5T6F0 453 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 OR7E24Q6IFN5 339 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 PRICKLE2Q7Z3G6 844 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 LAS2Q8IYD9 372 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 BPIFB2Q8N4F0 458 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 SCMH1Q96GD3 660 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 SLC5A7Q9GZV3 580 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 TCEAL2Q9H3H9 227 aaPredicted RBP12.04□□□□□ -0.48
TCOF1-213ENST00000514442 ZNF442Q9H7R0 627 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 MAN2C1Q9NTJ4 1040 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 VSX1Q9NZR4 365 aaPredicted RBP12.04□□□□□ -0.48
TCOF1-213ENST00000514442 ZNF281Q9Y2X9 895 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 CD53P19397 219 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 BDKRB2P30411 391 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 SELENOVP59797 346 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 MBOAT2Q6ZWT7 520 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 ANKRD10Q9NXR5 420 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 PLEK2Q9NYT0 353 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 HMSDA8MTL9 139 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 H7C417 338 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 MYF5P13349 255 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 KLHDC8BQ8IXV7 354 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 GPR148Q8TDV2 347 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 OR14A2Q96R54 314 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 FGF17O60258 216 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 WNT1P04628 370 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 OR8U9P0C7N5 309 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 SIRPAP78324 504 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 OPN5Q6U736 354 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 ESPNLQ6ZVH7 1005 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 MARCH3Q86UD3 253 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 SENP5Q96HI0 755 aaPredicted RBP12.03□□□□□ -0.48
TCOF1-213ENST00000514442 PTDSS2Q9BVG9 487 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 NTNG1Q9Y2I2 539 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 LRRC37AA6NMS7 1700 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 NRXN2Q9P2S2 1712 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 C7orf66A4D0T2 115 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 CXADRP78310 365 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 FABP9Q0Z7S8 132 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 RSU1Q15404 277 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 PLA1AQ53H76 456 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 STEAP1BQ6NZ63 245 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 KIAA0907Q7Z7F0 614 aaPredicted RBP12.03□□□□□ -0.48
TCOF1-213ENST00000514442 SFTPA1Q8IWL2 248 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 ZNF707Q96C28 371 aaPredicted RBP12.03□□□□□ -0.48
TCOF1-213ENST00000514442 GIMAP5Q96F15 307 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 SLC25A19Q9HC21 320 aa12.03□□□□□ -0.48
TCOF1-213ENST00000514442 SIDT1Q9NXL6 827 aaKnown RBP12.03□□□□□ -0.48
TCOF1-213ENST00000514442 ARID1BQ8NFD5 2236 aaPredicted RBP12.02□□□□□ -0.48
TCOF1-213ENST00000514442 SLC22A23A1A5C7 686 aa12.02□□□□□ -0.48
TCOF1-213ENST00000514442 ACOD1A6NK06 481 aa12.02□□□□□ -0.48
TCOF1-213ENST00000514442 HMGN4O00479 90 aa12.02□□□□□ -0.48
TCOF1-213ENST00000514442 FBXO24O75426 580 aa12.02□□□□□ -0.48
TCOF1-213ENST00000514442 IFNA2P01563 188 aa12.02□□□□□ -0.48
TCOF1-213ENST00000514442 ICAM2P13598 275 aa12.02□□□□□ -0.48
TCOF1-213ENST00000514442 UBE2MP61081 183 aaKnown RBP12.02□□□□□ -0.48
TCOF1-213ENST00000514442 CAMK2DQ13557 499 aa12.02□□□□□ -0.48
TCOF1-213ENST00000514442 BATFQ16520 125 aa12.02□□□□□ -0.48
TCOF1-213ENST00000514442 SLC35D2Q76EJ3 337 aa12.02□□□□□ -0.48
TCOF1-213ENST00000514442 HAVCR2Q8TDQ0 301 aa12.02□□□□□ -0.48
TCOF1-213ENST00000514442 PHYHIPQ92561 330 aa12.02□□□□□ -0.48
TCOF1-213ENST00000514442 NINJ1Q92982 152 aa12.02□□□□□ -0.48
TCOF1-213ENST00000514442 OR5B12Q96R08 314 aa12.02□□□□□ -0.48
TCOF1-213ENST00000514442 LUZP4Q9P127 313 aa12.02□□□□□ -0.48
TCOF1-213ENST00000514442 KCNS2Q9ULS6 477 aa12.02□□□□□ -0.48
TCOF1-213ENST00000514442 RFPL4AA6NLU0 287 aa12.02□□□□□ -0.49
TCOF1-213ENST00000514442 ZNF850A8MQ14 1090 aa12.02□□□□□ -0.49
TCOF1-213ENST00000514442 RFPL4AL1F8VTS6 287 aa12.02□□□□□ -0.49
TCOF1-213ENST00000514442 OLFM2O95897 454 aa12.02□□□□□ -0.49
TCOF1-213ENST00000514442 IGHA2P01877 340 aa12.02□□□□□ -0.49
TCOF1-213ENST00000514442 NME1P15531 152 aaKnown RBP12.02□□□□□ -0.49
TCOF1-213ENST00000514442 TSFMP43897 325 aaKnown RBP12.02□□□□□ -0.49
TCOF1-213ENST00000514442 ABI3BPQ7Z7G0 1075 aa12.02□□□□□ -0.49
TCOF1-213ENST00000514442 OR52B4Q8NGK2 314 aa12.02□□□□□ -0.49
TCOF1-213ENST00000514442 ALG14Q96F25 216 aa12.02□□□□□ -0.49
TCOF1-213ENST00000514442 NMNAT3Q96T66 252 aa12.02□□□□□ -0.49
TCOF1-213ENST00000514442 NOX4Q9NPH5 578 aa12.02□□□□□ -0.49
TCOF1-213ENST00000514442 H7C1Q1 480 aa12.02□□□□□ -0.49
TCOF1-213ENST00000514442 GALR3O60755 368 aaPredicted RBP12.02□□□□□ -0.49
TCOF1-213ENST00000514442 CD63P08962 238 aa12.02□□□□□ -0.49
TCOF1-213ENST00000514442 OR8G3PP0DMU2 310 aa12.02□□□□□ -0.49
TCOF1-213ENST00000514442 HAAOP46952 286 aa12.02□□□□□ -0.49
TCOF1-213ENST00000514442 OR2B8PP59922 312 aa12.02□□□□□ -0.49
TCOF1-213ENST00000514442 FAAP20Q6NZ36 180 aa12.02□□□□□ -0.49
TCOF1-213ENST00000514442 ZNF679Q8IYX0 411 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms