RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 OXGR1Q96P68 337 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 ERMAPQ96PL5 475 aaPredicted RBP10.72□□□□□ -0.69
UPF3A-210ENST00000493727 SLC38A2Q96QD8 506 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 Q9H521 79 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 PLEKHF2Q9H8W4 249 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 SLC25A19Q9HC21 320 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 BEX4Q9NWD9 120 aaPredicted RBP10.72□□□□□ -0.69
UPF3A-210ENST00000493727 FAM118AQ9NWS6 357 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 IMPAD1Q9NX62 359 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 TAS2R5Q9NYW4 299 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 KLHL9Q9P2J3 617 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 GRHPRQ9UBQ7 328 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 BAIAP2Q9UQB8 552 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 ZNF175Q9Y473 711 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 NOX1Q9Y5S8 564 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 IER3IP1Q9Y5U9 82 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 ZAR1LA6NP61 321 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 A8MXE2 369 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 MS4A18H0YCH9 400 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 DLGAP1O14490 977 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 XKRYO14609 159 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 CYTIPO60759 359 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 RAMP1O60894 148 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 IFNGP01579 166 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 HMGN1P05114 100 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 HEXAP06865 529 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 TSPAN19P0C672 248 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 EPHA2P29317 976 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 GRK5P34947 590 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 FBN1P35555 2871 aaKnown RBP10.71□□□□□ -0.69
UPF3A-210ENST00000493727 P2RY4P51582 365 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 CDC42P60953 191 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 H3F3AP84243 136 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 MYBPC1Q00872 1141 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 FHL1Q13642 323 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 MELKQ14680 651 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 RNPS1Q15287 305 aaKnown RBP10.71□□□□□ -0.69
UPF3A-210ENST00000493727 MS4A18Q3C1V0 323 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 SLC35F1Q5T1Q4 408 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 ABLIM2Q6H8Q1 611 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 PLXDC2Q6UX71 529 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 HDDC2Q7Z4H3 204 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 PXKQ7Z7A4 578 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 JAZF1Q86VZ6 243 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 GCNT2Q8N0V5 402 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 OR4Q3Q8NH05 313 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 RNF128Q8TEB7 428 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 ABHD3Q8WU67 409 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 GPX7Q96SL4 187 aaPredicted RBP10.71□□□□□ -0.69
UPF3A-210ENST00000493727 APOL4Q9BPW4 351 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 SF3B5Q9BWJ5 86 aaKnown RBP10.71□□□□□ -0.69
UPF3A-210ENST00000493727 MBNL3Q9NUK0 354 aaKnown RBP10.71□□□□□ -0.69
UPF3A-210ENST00000493727 TVP23BQ9NYZ1 205 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 EMC3Q9P0I2 261 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 ADAM18Q9Y3Q7 739 aa10.71□□□□□ -0.69
UPF3A-210ENST00000493727 SONP18583 2426 aaKnown RBP10.7□□□□□ -0.7
UPF3A-210ENST00000493727 TEX13CA0A0J9YWL9 993 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 SHISA3A0PJX4 238 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 ZNF726A6NNF4 738 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 RIIAD1A6NNX1 92 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 H0YAE9 185 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 BHLHE40O14503 412 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 TNFSF13O75888 250 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 AQP8O94778 261 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 BCL10O95999 233 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 HLA-DOBP13765 273 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 IFNGR1P15260 489 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 ZNF3P17036 446 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 SDHAP31040 664 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 GGT2P36268 569 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 CLDN17P56750 224 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 RPL27P61353 136 aaKnown RBP10.7□□□□□ -0.7
UPF3A-210ENST00000493727 KRR1Q13601 381 aaKnown RBP10.7□□□□□ -0.7
UPF3A-210ENST00000493727 SLC17A1Q14916 467 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 SNAPC1Q16533 368 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 ACKR1Q16570 336 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 SLX4IPQ5VYV7 408 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 SHEQ5VZ18 495 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 FAM205BPQ63HN1 556 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 GPR139Q6DWJ6 353 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 SLC35D2Q76EJ3 337 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 LRRC75AQ8NAA5 344 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 SETD9Q8NE22 299 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 OTULINQ96BN8 352 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 RASD2Q96D21 266 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 TSPAN32Q96QS1 320 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 PITX2Q99697 317 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 TXNIPQ9H3M7 391 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 NRIP3Q9NQ35 241 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 ELOVL5Q9NYP7 299 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 ZNF226Q9NYT6 803 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 B3GAT1Q9P2W7 334 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 KLHL21Q9UJP4 597 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 ZNF346Q9UL40 294 aaKnown RBP10.7□□□□□ -0.7
UPF3A-210ENST00000493727 RAB26Q9ULW5 256 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 CLEC4AQ9UMR7 237 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 CUBNO60494 3623 aa10.7□□□□□ -0.7
UPF3A-210ENST00000493727 A6NIZ1 184 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 NPIPB13A6NJU9 1138 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 NPIPB4C9JG80 1138 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms