RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 CSNK1A1P48729 337 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 FOXA1P55317 472 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 KIAA0040Q15053 153 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 LY6EQ16553 131 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 ZNF404Q494X3 552 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 ARSJQ5FYB0 599 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-233ENST00000489352 H1FNTQ75WM6 255 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-233ENST00000489352 C1orf87Q8N0U7 546 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 NATD1Q8N6N6 113 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 OR7A2PQ8NGA2 310 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 PSMA8Q8TAA3 256 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 C8orf46Q8TAG6 207 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 ROPN1LQ96C74 230 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 RCHY1Q96PM5 261 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 TMEM237Q96Q45 408 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 OR2V2Q96R30 315 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 KCNN2Q9H2S1 579 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 OR51I1Q9H343 314 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 GCM1Q9NP62 436 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 MAN2C1Q9NTJ4 1040 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 ERVK-18Q9QC07 812 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 PRDM4Q9UKN5 801 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 SNX24Q9Y343 169 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 C5orf49A4QMS7 147 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 H3BSA7 217 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 H3BUX3 64 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 M0R082 166 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 SLC28A1O00337 649 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 OR2T1O43869 369 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 GUSBP08236 651 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 LAMP1P11279 417 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 SNRPBP14678 240 aaKnown RBP9.46□□□□□ -0.9
HDAC6-233ENST00000489352 ZNF26P17031 533 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-233ENST00000489352 AHCYP23526 432 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 ZNF75DP51815 510 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 ARHGDIAP52565 204 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 PPP1CBP62140 327 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 DGCR2P98153 550 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 DCDC5Q6ZRR9 648 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 ZNF101Q8IZC7 436 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 ZNF420Q8TAQ5 688 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-233ENST00000489352 ZNF417Q8TAU3 575 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 ABHD4Q8TB40 342 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 ZNF587Q96SQ5 575 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-233ENST00000489352 SIRPDQ9H106 197 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 MMADHCQ9H3L0 296 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-233ENST00000489352 MAB21L2Q9Y586 359 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 FRAS1Q86XX4 4008 aa9.46□□□□□ -0.9
HDAC6-233ENST00000489352 LOC102725191A0A1B0GVB3 256 aa9.45□□□□□ -0.9
HDAC6-233ENST00000489352 FTCDNL1E5RQL4 147 aa9.45□□□□□ -0.9
HDAC6-233ENST00000489352 TP73O15350 636 aa9.45□□□□□ -0.9
HDAC6-233ENST00000489352 IRF2P14316 349 aa9.45□□□□□ -0.9
HDAC6-233ENST00000489352 GDI2P50395 445 aaKnown RBP9.45□□□□□ -0.9
HDAC6-233ENST00000489352 RPL38P63173 70 aaKnown RBP9.45□□□□□ -0.9
HDAC6-233ENST00000489352 GUCA2AQ02747 115 aa9.45□□□□□ -0.9
HDAC6-233ENST00000489352 TMEM255AQ5JRV8 349 aa9.45□□□□□ -0.9
HDAC6-233ENST00000489352 LYPD2Q6UXB3 125 aa9.45□□□□□ -0.9
HDAC6-233ENST00000489352 VMO1Q7Z5L0 202 aa9.45□□□□□ -0.9
HDAC6-233ENST00000489352 SLC22A9Q8IVM8 553 aa9.45□□□□□ -0.9
HDAC6-233ENST00000489352 ATG16L2Q8NAA4 619 aa9.45□□□□□ -0.9
HDAC6-233ENST00000489352 OR4K5Q8NGD3 323 aa9.45□□□□□ -0.9
HDAC6-233ENST00000489352 OSBPL9Q96SU4 736 aa9.45□□□□□ -0.9
HDAC6-233ENST00000489352 CCNB1IP1Q9NPC3 277 aa9.45□□□□□ -0.9
HDAC6-233ENST00000489352 RNF103-CHMP3A0A140T963 221 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 A0A1B0GVI7 797 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 MEIOCA2RUB1 952 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 TMEM114B3SHH9 223 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 NPIPB7O75200 414 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 SERPINI2O75830 405 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 THY1P04216 161 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 CCDC159P0C7I6 412 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 GKN3PP0CG01 181 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 HLA-DOBP13765 273 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 CBLP22681 906 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 PRPH2P23942 346 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 ARRB2P32121 409 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 PLAURQ03405 335 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 TAF11Q15544 211 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 GALNTL6Q49A17 601 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 TCTEX1D4Q5JR98 221 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 MRPL2Q5T653 305 aaKnown RBP9.44□□□□□ -0.9
HDAC6-233ENST00000489352 LIPMQ5VYY2 423 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 TNFAIP8L2Q6P589 184 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-233ENST00000489352 ARL9Q6T311 187 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 LRRC18Q8N456 261 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 CCNYL1Q8N7R7 359 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 TFAP2CQ92754 450 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 TXNDC15Q96J42 360 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 DDOQ99489 341 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 SSX3Q99909 188 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 MCRIP2Q9BUT9 160 aaKnown RBP9.44□□□□□ -0.9
HDAC6-233ENST00000489352 ELOVL3Q9HB03 270 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 TMEM38BQ9NVV0 291 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 TMED5Q9Y3A6 229 aa9.44□□□□□ -0.9
HDAC6-233ENST00000489352 A0A1W2PRD5 423 aa9.43□□□□□ -0.9
HDAC6-233ENST00000489352 A0A1W2PRF3 423 aa9.43□□□□□ -0.9
HDAC6-233ENST00000489352 A0A1W2PRM7 423 aa9.43□□□□□ -0.9
HDAC6-233ENST00000489352 H3BQF6 201 aa9.43□□□□□ -0.9
HDAC6-233ENST00000489352 NPFFO15130 113 aa9.43□□□□□ -0.9
HDAC6-233ENST00000489352 RAMP3O60896 148 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms