RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 SH2D2AQ9NP31 389 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 PRODH2Q9UF12 536 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 ZNF223Q9UK11 482 aaPredicted RBP3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 TDRKHQ9Y2W6 561 aaKnown RBP3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 ATG4BQ9Y4P1 393 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 PLCE1Q9P212 2302 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 COL7A1Q02388 2944 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 C13orf42A0A1B0GVH6 325 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 WI2-2373I1.2A0A1W2PRP0 233 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 TMEM129A0AVI4 362 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 EEF1E1-BLOC1S5C9J1V9 151 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 EEF1E1O43324 174 aaKnown RBP3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 PRPSAP2O60256 369 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 GLSO94925 669 aaPredicted RBP3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 NUDT14O95848 222 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 SLC35E2P0CK97 266 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 LAMP1P11279 417 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 CPA3P15088 417 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 CXCR2P25025 360 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 PSMA2P25787 234 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 PCK1P35558 622 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 CYLC1P35663 651 aaPredicted RBP3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 SLC26A3P40879 764 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 CDH6P55285 790 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 MLF1P58340 268 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 RPL26P61254 145 aaKnown RBP3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 DPYSL2Q16555 572 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 MEP1BQ16820 701 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 CCSMST1Q4G0I0 132 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 ACSF3Q4G176 576 aaPredicted RBP3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 ANKRD20A4Q4UJ75 823 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 SFT2D3Q587I9 215 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 PAN3Q58A45 887 aaKnown RBP3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 HSP90AA4PQ58FG1 418 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 ANKRD20A2Q5SQ80 823 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 LDLRAP1Q5SW96 308 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 ANKRD20A1Q5TYW2 823 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 ANKRD20A3Q5VUR7 823 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 DNAJC24Q6P3W2 148 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 APOOLQ6UXV4 268 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 C12orf54Q6X4T0 127 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 GBP6Q6ZN66 633 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 DNM1P46Q6ZS02 220 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 ZNF550Q7Z398 422 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 PHF13Q86YI8 300 aaPredicted RBP3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 CLDN19Q8N6F1 224 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 TTC29Q8NA56 475 aaPredicted RBP3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 TFGQ92734 400 aaPredicted RBP3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 CCDC47Q96A33 483 aaKnown RBP3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 SLCO4A1Q96BD0 722 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 TADA1Q96BN2 335 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 MAGEB18Q96M61 343 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 TTC25Q96NG3 672 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 WFIKKN1Q96NZ8 548 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 OR5M11Q96RB7 305 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 CYTH2Q99418 400 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 TRIM45Q9H8W5 580 aaPredicted RBP3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 ZWILCHQ9H900 591 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 ADGRL4Q9HBW9 690 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 DNAJC11Q9NVH1 559 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 ZNHIT6Q9NWK9 470 aaKnown RBP3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 SMOXQ9NWM0 555 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 KLHL28Q9NXS3 571 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 LEF1Q9UJU2 399 aaPredicted RBP3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 MRTO4Q9UKD2 239 aaKnown RBP3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 DNPEPQ9ULA0 475 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 RPL26L1Q9UNX3 145 aaKnown RBP3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 ARL5AQ9Y689 179 aa3.1□□□□□ -1.91
SMARCC1-207ENST00000485833 IGKV1-8A0A0C4DH67 115 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 GLYATL1P3A0A0U1RQE8 302 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 A0A1W2PPV9 198 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 BICDL2A1A5D9 508 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 ZNF860A6NHJ4 632 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 H0YGG7 62 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 NDC80O14777 642 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 PSMA7O14818 248 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 GAS8O95995 478 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 FCER2P06734 321 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 NUDT17P0C025 328 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 UCHL3P15374 230 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 UCP1P25874 307 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 SHMT2P34897 504 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 HCAR3P49019 387 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 DNASE1L1P49184 302 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 CYB561P49447 251 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 SLC7A2P52569 658 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 AIF1P55008 147 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 SLC26A5P58743 744 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 XIAPP98170 497 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 ZNF544Q6NX49 715 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 LRRC8BQ6P9F7 803 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 CD164L2Q6UWJ8 174 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 LUZP2Q86TE4 346 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 RPS19BP1Q86WX3 136 aaKnown RBP3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 OR2M7Q8NG81 312 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 OR5T3Q8NGG3 340 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 OR6M1Q8NGM8 313 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 OR9A4Q8NGU2 314 aa3.09□□□□□ -1.91
SMARCC1-207ENST00000485833 LKAAEAR1Q8TD35 194 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms