RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 ACTA1P68133 377 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 BASP1P80723 227 aaKnown RBP3.59□□□□□ -1.83
PTCD3-214ENST00000483925 BCL2L1Q07817 233 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 UNC119Q13432 240 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 ZNF146Q15072 292 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 LTB4RQ15722 352 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 UAP1Q16222 522 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-214ENST00000483925 KCTD19Q17RG1 926 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-214ENST00000483925 NSUN5P1Q3KNT7 163 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 VAX1Q5SQQ9 334 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 SAPCD1Q5SSQ6 148 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 OLFML2AQ68BL7 652 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 CLEC18BQ6UXF7 455 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 TFAP2EQ6VUC0 442 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 DNM1P46Q6ZS02 220 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 Q6ZSR9 355 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 TMEM150AQ86TG1 271 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 ZNF738Q8NE65 137 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 DUSP18Q8NEJ0 188 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 OR8J2Q8NGG1 315 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 OR4Q3Q8NH05 313 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 FLVCR1-AS1Q8TAF5 88 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 ZNF519Q8TB69 540 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 OR8D1Q8WZ84 308 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 NDRG1Q92597 394 aaKnown RBP3.59□□□□□ -1.83
PTCD3-214ENST00000483925 MED30Q96HR3 178 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 OR5B12Q96R08 314 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 FOXC2Q99958 501 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 TRIM51Q9BSJ1 452 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 DCUN1D5Q9BTE7 237 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 SRXN1Q9BYN0 137 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 POTEKPQ9BYX7 375 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 PORCNQ9H237 461 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 PARLQ9H300 379 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 WDR54Q9H977 334 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 C6orf50Q9HD87 102 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 TIGARQ9NQ88 270 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 EXD2Q9NVH0 621 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 ZNF446Q9NWS9 450 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 USE1Q9NZ43 259 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 MAT2BQ9NZL9 334 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 ASIC3Q9UHC3 531 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 BTNL2Q9UIR0 455 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 MMP17Q9ULZ9 603 aa3.59□□□□□ -1.83
PTCD3-214ENST00000483925 IGHV4-30-2A0A087WSY4 118 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 ANKRD20A5PA0PJZ0 165 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 PSMB11A5LHX3 300 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 CYSRT1A8MQ03 144 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 A8MX80 341 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 KLRC4-KLRK1H3BQV0 150 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 CLDN34H7C241 214 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 hCG_2039718K7EN88 272 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 SLC17A2O00624 439 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 TOX3O15405 576 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-214ENST00000483925 FKBP6O75344 327 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 GJB5O95377 273 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 BRI3O95415 125 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 CALM1P0DP23 149 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 CALM2P0DP24 149 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 CALM3P0DP25 149 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 ZNF250P15622 560 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 GCKP35557 465 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 RBM34P42696 430 aaKnown RBP3.58□□□□□ -1.84
PTCD3-214ENST00000483925 BTDP43251 543 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 KIR2DS2P43631 304 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 XKP51811 444 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 NDUFV3P56181 108 aaKnown RBP3.58□□□□□ -1.84
PTCD3-214ENST00000483925 TAS2R39P59534 338 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 OR2B8PP59922 312 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 DSTNP60981 165 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 ERVK11-1P61568 191 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 RPL32P62910 135 aaKnown RBP3.58□□□□□ -1.84
PTCD3-214ENST00000483925 C2orf80Q0P641 193 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 CALCOCO2Q13137 446 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 MED21Q13503 144 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 TFDP2Q14188 446 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 GGTLC2Q14390 218 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 PON2Q15165 354 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 CCL14Q16627 93 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 NDUFAF6Q330K2 333 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 ZNF585BQ52M93 769 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 GPRC6AQ5T6X5 926 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 RWDD4Q6NW29 188 aaKnown RBP3.58□□□□□ -1.84
PTCD3-214ENST00000483925 Q6ZN92 141 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 Q6ZRP5 223 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 PEX26Q7Z412 305 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 PRR22Q8IZ63 422 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 PUSL1Q8N0Z8 303 aaKnown RBP3.58□□□□□ -1.84
PTCD3-214ENST00000483925 ABHD12Q8N2K0 398 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 VN1R2Q8NFZ6 395 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 OR5T1Q8NG75 326 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 FANK1Q8TC84 345 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 IFT81Q8WYA0 676 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 EEF1AKMT3Q96AZ1 226 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 DUS3LQ96G46 650 aaKnown RBP3.58□□□□□ -1.84
PTCD3-214ENST00000483925 GMPPAQ96IJ6 420 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-214ENST00000483925 GPR21Q99679 349 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 RARRES2Q99969 163 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 MICU1Q9BPX6 476 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 OCR1Q9BZK8 76 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms