RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 CCNOP22674 350 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 TNFSF4P23510 183 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 WNT5AP41221 380 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 CCT5P48643 541 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 MAD2L1Q13257 205 aaPredicted RBP9.98□□□□□ -0.81
LSM2-209ENST00000470083 CDK5R2Q13319 367 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 CASP8Q14790 479 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 MAPK11Q15759 364 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 NRN1LQ496H8 165 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 MTX3Q5HYI7 312 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 DHRS7BQ6IAN0 325 aaPredicted RBP9.98□□□□□ -0.81
LSM2-209ENST00000470083 C8orf74Q6P047 294 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 LRRC34Q8IZ02 419 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 OR6S1Q8NH40 331 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 AGR3Q8TD06 166 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 GATAD2BQ8WXI9 593 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 LRTOMTQ8WZ04 291 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 PHF21AQ96BD5 680 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 TUBGCP3Q96CW5 907 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 ASPNQ9BXN1 380 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 ARMC7Q9H6L4 198 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 ACOXLQ9NUZ1 547 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 PSMC3IPQ9P2W1 217 aaPredicted RBP9.98□□□□□ -0.81
LSM2-209ENST00000470083 EIF3KQ9UBQ5 218 aaKnown RBP9.98□□□□□ -0.81
LSM2-209ENST00000470083 MIOXQ9UGB7 285 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 PPP1R3CQ9UQK1 317 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 SACSQ9NZJ4 4579 aa9.98□□□□□ -0.81
LSM2-209ENST00000470083 TET2Q6N021 2002 aaPredicted RBP9.97□□□□□ -0.81
LSM2-209ENST00000470083 A0A1W2PPM1 405 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 P2RY10O00398 339 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 MPIG6BO95866 241 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 MMP7P09237 267 aaPredicted RBP9.97□□□□□ -0.81
LSM2-209ENST00000470083 STOMP27105 288 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 BIDP55957 195 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 PCBP3P57721 371 aaKnown RBP9.97□□□□□ -0.81
LSM2-209ENST00000470083 HOXC5Q00444 222 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 COL10A1Q03692 680 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 HSF2Q03933 536 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 EMX2Q04743 252 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 DBPQ10586 325 aaPredicted RBP9.97□□□□□ -0.81
LSM2-209ENST00000470083 SLC27A4Q6P1M0 643 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 LRFN4Q6PJG9 635 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 RFPL4BQ6ZWI9 263 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 ZNF572Q7Z3I7 529 aaPredicted RBP9.97□□□□□ -0.81
LSM2-209ENST00000470083 GALNT4Q8N4A0 578 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 OR6X1Q8NH79 312 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 VANGL1Q8TAA9 524 aaPredicted RBP9.97□□□□□ -0.81
LSM2-209ENST00000470083 SLC35B4Q969S0 331 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 TESCQ96BS2 214 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 NEIL1Q96FI4 390 aaPredicted RBP9.97□□□□□ -0.81
LSM2-209ENST00000470083 POM121L2Q96KW2 1035 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 PCGF1Q9BSM1 259 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 SPATA9Q9BWV2 254 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 TRIM15Q9C019 465 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 DPAGT1Q9H3H5 408 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 TMEM165Q9HC07 324 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 MRPL39Q9NYK5 338 aaKnown RBP9.97□□□□□ -0.81
LSM2-209ENST00000470083 CALML5Q9NZT1 146 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 RPS6KB2Q9UBS0 482 aa9.97□□□□□ -0.81
LSM2-209ENST00000470083 DOCK11Q5JSL3 2073 aa9.96□□□□□ -0.81
LSM2-209ENST00000470083 CENPVL3A0A0U1RRI6 287 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 PLPP3O14495 311 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 ENSAO43768 121 aaKnown RBP9.96□□□□□ -0.82
LSM2-209ENST00000470083 TIMM8AO60220 97 aaPredicted RBP9.96□□□□□ -0.82
LSM2-209ENST00000470083 SERPINI2O75830 405 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 BGLAPP02818 100 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 SFTPBP07988 381 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 AHCYP23526 432 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 ECHS1P30084 290 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 CFHR2P36980 270 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 PITPNBP48739 271 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 MMP16P51512 607 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 CRISP3P54108 245 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 PPP1CBP62140 327 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 PCLAFQ15004 111 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 PABPC1L2AQ5JQF8 200 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 NLRC3Q7RTR2 1065 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 ZER1Q7Z7L7 766 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 TRIML2Q8N7C3 387 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 HIPK4Q8NE63 616 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 OR8B3Q8NGG8 313 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 C10orf82Q8WW14 230 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 ITLN1Q8WWA0 313 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 ZNF566Q969W8 418 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 CCDC115Q96NT0 180 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 OR8B2Q96RD0 313 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 EPYCQ99645 322 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 CDADC1Q9BWV3 514 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 P2RX2Q9UBL9 471 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 IL19Q9UHD0 177 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 TBK1Q9UHD2 729 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 ZNF232Q9UNY5 417 aa9.96□□□□□ -0.82
LSM2-209ENST00000470083 LOC100509620A0A075B734 347 aa9.95□□□□□ -0.82
LSM2-209ENST00000470083 IGHV1-69DA0A0B4J2H0 117 aa9.95□□□□□ -0.82
LSM2-209ENST00000470083 A0A1B0GWA3 101 aa9.95□□□□□ -0.82
LSM2-209ENST00000470083 C5orf49A4QMS7 147 aa9.95□□□□□ -0.82
LSM2-209ENST00000470083 CCDC154A6NI56 674 aa9.95□□□□□ -0.82
LSM2-209ENST00000470083 K7EIL1 84 aa9.95□□□□□ -0.82
LSM2-209ENST00000470083 IFNL4K9M1U5 179 aa9.95□□□□□ -0.82
LSM2-209ENST00000470083 PHYHO14832 338 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms