RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 METTL17Q9H7H0 456 aaPredicted RBP17.16■□□□□ 0.34
VIM-203ENST00000469543 RALGAPA1Q6GYQ0 2036 aa17.16■□□□□ 0.34
VIM-203ENST00000469543 ALDOBP05062 364 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 IFNGR1P15260 489 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 DYRK1AQ13627 763 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 TMEM205Q6UW68 189 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 OR8H1Q8NGG4 311 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 OR51A2Q8NGJ7 313 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 TXNIPQ9H3M7 391 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 ZMAT3Q9HA38 289 aaKnown RBP17.15■□□□□ 0.34
VIM-203ENST00000469543 APMAPQ9HDC9 416 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 ELF5Q9UKW6 265 aaPredicted RBP17.15■□□□□ 0.34
VIM-203ENST00000469543 ZDBF2Q9HCK1 2354 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 A0A1W2PQD3 144 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 MS4A18H0YCH9 400 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 ANXA3P12429 323 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 CSRP1P21291 193 aaKnown RBP17.15■□□□□ 0.34
VIM-203ENST00000469543 CAMK2DQ13557 499 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 EIF2B1Q14232 305 aaKnown RBP17.15■□□□□ 0.34
VIM-203ENST00000469543 MS4A18Q3C1V0 323 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 HACD4Q5VWC8 232 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 LRFN4Q6PJG9 635 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 NDUFAF7Q7L592 441 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 GRINAQ7Z429 371 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 KRT77Q7Z794 578 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 BPHLQ86WA6 291 aaPredicted RBP17.15■□□□□ 0.34
VIM-203ENST00000469543 OR52B4Q8NGK2 314 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 OR2M2Q96R28 347 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 ING4Q9UNL4 249 aa17.15■□□□□ 0.34
VIM-203ENST00000469543 TRBV5-7A0A0A0MS05 114 aa17.14■□□□□ 0.34
VIM-203ENST00000469543 TMEM212A6NML5 194 aa17.14■□□□□ 0.34
VIM-203ENST00000469543 CENPBD1B2RD01 187 aa17.14■□□□□ 0.34
VIM-203ENST00000469543 PEX14O75381 377 aa17.14■□□□□ 0.34
VIM-203ENST00000469543 ZNF679Q8IYX0 411 aa17.14■□□□□ 0.34
VIM-203ENST00000469543 DVL3Q92997 716 aaPredicted RBP17.14■□□□□ 0.34
VIM-203ENST00000469543 NXPE2Q96DL1 559 aa17.14■□□□□ 0.34
VIM-203ENST00000469543 NOX3Q9HBY0 568 aa17.14■□□□□ 0.34
VIM-203ENST00000469543 STMN3Q9NZ72 180 aa17.14■□□□□ 0.34
VIM-203ENST00000469543 TMEM200CA6NKL6 621 aa17.14■□□□□ 0.33
VIM-203ENST00000469543 EIF1AYO14602 144 aaKnown RBP17.14■□□□□ 0.33
VIM-203ENST00000469543 POU3F4P49335 361 aa17.14■□□□□ 0.33
VIM-203ENST00000469543 C2orf76Q3KRA6 126 aa17.14■□□□□ 0.33
VIM-203ENST00000469543 CD276Q5ZPR3 534 aa17.14■□□□□ 0.33
VIM-203ENST00000469543 OR10K2Q6IF99 312 aa17.14■□□□□ 0.33
VIM-203ENST00000469543 IRF2BPLQ9H1B7 796 aa17.14■□□□□ 0.33
VIM-203ENST00000469543 C12orf10Q9HB07 376 aa17.14■□□□□ 0.33
VIM-203ENST00000469543 CA10Q9NS85 328 aa17.14■□□□□ 0.33
VIM-203ENST00000469543 CGGBP1Q9UFW8 167 aaPredicted RBP17.14■□□□□ 0.33
VIM-203ENST00000469543 EMC9Q9Y3B6 208 aa17.14■□□□□ 0.33
VIM-203ENST00000469543 LRP12Q9Y561 859 aa17.14■□□□□ 0.33
VIM-203ENST00000469543 TMEM14AQ9Y6G1 99 aa17.14■□□□□ 0.33
VIM-203ENST00000469543 A0A1W2PQM1 296 aa17.14■□□□□ 0.33
VIM-203ENST00000469543 DCDC2BA2VCK2 349 aa17.14■□□□□ 0.33
VIM-203ENST00000469543 EFNA2O43921 213 aa17.14■□□□□ 0.33
VIM-203ENST00000469543 ALX3O95076 343 aa17.14■□□□□ 0.33
VIM-203ENST00000469543 MAPK3P27361 379 aaPredicted RBP17.14■□□□□ 0.33
VIM-203ENST00000469543 EIF1AXP47813 144 aaKnown RBP17.14■□□□□ 0.33
VIM-203ENST00000469543 UBE2MP61081 183 aaKnown RBP17.14■□□□□ 0.33
VIM-203ENST00000469543 OR8S1Q8NH09 359 aa17.14■□□□□ 0.33
VIM-203ENST00000469543 COPZ2Q9P299 210 aa17.14■□□□□ 0.33
VIM-203ENST00000469543 ANKRD20A5PA0PJZ0 165 aa17.13■□□□□ 0.33
VIM-203ENST00000469543 FTCDNL1E5RQL4 147 aa17.13■□□□□ 0.33
VIM-203ENST00000469543 AHSA1O95433 338 aa17.13■□□□□ 0.33
VIM-203ENST00000469543 CALCBP10092 127 aa17.13■□□□□ 0.33
VIM-203ENST00000469543 OC90Q02509 493 aaPredicted RBP17.13■□□□□ 0.33
VIM-203ENST00000469543 POU3F1Q03052 451 aaPredicted RBP17.13■□□□□ 0.33
VIM-203ENST00000469543 LGALSLQ3ZCW2 172 aaPredicted RBP17.13■□□□□ 0.33
VIM-203ENST00000469543 OR2I1PQ8NGU4 316 aa17.13■□□□□ 0.33
VIM-203ENST00000469543 OR2T35Q8NGX2 323 aa17.13■□□□□ 0.33
VIM-203ENST00000469543 DNASE2BQ8WZ79 361 aa17.13■□□□□ 0.33
VIM-203ENST00000469543 DLL4Q9NR61 685 aa17.13■□□□□ 0.33
VIM-203ENST00000469543 STEAP1Q9UHE8 339 aa17.13■□□□□ 0.33
VIM-203ENST00000469543 ASPMQ8IZT6 3477 aa17.13■□□□□ 0.33
VIM-203ENST00000469543 TRAV18A0A075B6X5 111 aa17.13■□□□□ 0.33
VIM-203ENST00000469543 G3V3Q6 166 aa17.13■□□□□ 0.33
VIM-203ENST00000469543 SULT1A3P0DMM9 295 aa17.13■□□□□ 0.33
VIM-203ENST00000469543 SULT1A4P0DMN0 295 aa17.13■□□□□ 0.33
VIM-203ENST00000469543 SLC18B1Q6NT16 456 aa17.13■□□□□ 0.33
VIM-203ENST00000469543 MT-ATP6P00846 226 aa17.12■□□□□ 0.33
VIM-203ENST00000469543 HEXBP07686 556 aa17.12■□□□□ 0.33
VIM-203ENST00000469543 RASGEF1BQ0VAM2 473 aa17.12■□□□□ 0.33
VIM-203ENST00000469543 PCGF3Q3KNV8 242 aa17.12■□□□□ 0.33
VIM-203ENST00000469543 NKAIN1Q4KMZ8 207 aa17.12■□□□□ 0.33
VIM-203ENST00000469543 PTCRAQ6ISU1 281 aaPredicted RBP17.12■□□□□ 0.33
VIM-203ENST00000469543 ANKRD37Q7Z713 158 aa17.12■□□□□ 0.33
VIM-203ENST00000469543 ASB5Q8WWX0 329 aa17.12■□□□□ 0.33
VIM-203ENST00000469543 MRPS17Q9Y2R5 130 aaKnown RBP17.12■□□□□ 0.33
VIM-203ENST00000469543 CTAG2O75638 210 aa17.12■□□□□ 0.33
VIM-203ENST00000469543 GLSO94925 669 aaPredicted RBP17.12■□□□□ 0.33
VIM-203ENST00000469543 TEX30Q5JUR7 227 aa17.12■□□□□ 0.33
VIM-203ENST00000469543 BAIAP2L2Q6UXY1 529 aa17.12■□□□□ 0.33
VIM-203ENST00000469543 DCXRQ7Z4W1 244 aa17.12■□□□□ 0.33
VIM-203ENST00000469543 PLPP5Q8NEB5 264 aa17.12■□□□□ 0.33
VIM-203ENST00000469543 CMTM3Q96MX0 182 aa17.12■□□□□ 0.33
VIM-203ENST00000469543 ZNF768Q9H5H4 540 aaKnown RBP17.12■□□□□ 0.33
VIM-203ENST00000469543 PLEKHA1Q9HB21 404 aa17.12■□□□□ 0.33
VIM-203ENST00000469543 TAS2R4Q9NYW5 299 aa17.12■□□□□ 0.33
VIM-203ENST00000469543 EIF3KQ9UBQ5 218 aaKnown RBP17.12■□□□□ 0.33
VIM-203ENST00000469543 TRBV11-1A0A0K0K1C0 115 aa17.11■□□□□ 0.33
VIM-203ENST00000469543 RAB40ALP0C0E4 278 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms