RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 DPM1O60762 260 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 CCNB2O95067 398 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 SLC25A27O95847 323 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 PLEKP08567 350 aaPredicted RBP2.19□□□□□ -2.06
VCL-203ENST00000461383 POLR2MP0CAP2 368 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 TDGF1P13385 188 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 GSTM3P21266 225 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 TDGF1P3P51864 188 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 PSG5Q15238 335 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 PSMD5Q16401 504 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 GUCA2BQ16661 112 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 ZSCAN26Q16670 478 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 KCTD19Q17RG1 926 aaPredicted RBP2.19□□□□□ -2.06
VCL-203ENST00000461383 XKR4Q5GH76 650 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 TTC19Q6DKK2 380 aaPredicted RBP2.19□□□□□ -2.06
VCL-203ENST00000461383 ZNF621Q6ZSS3 439 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 COX15Q7KZN9 410 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 PRELID2Q8N945 189 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 OR51G1Q8NGK1 321 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 LYPD6BQ8NI32 183 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 NRGNQ92686 78 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 AURKBQ96GD4 344 aaPredicted RBP2.19□□□□□ -2.06
VCL-203ENST00000461383 TSSK3Q96PN8 268 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 XPO6Q96QU8 1125 aaKnown RBP2.19□□□□□ -2.06
VCL-203ENST00000461383 UGT1A7Q9HAW7 530 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 UGT1A8Q9HAW9 530 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 RPRD1BQ9NQG5 326 aaKnown RBP2.19□□□□□ -2.06
VCL-203ENST00000461383 CCDC59Q9P031 241 aaKnown RBP2.19□□□□□ -2.06
VCL-203ENST00000461383 PDP1Q9P0J1 537 aaPredicted RBP2.19□□□□□ -2.06
VCL-203ENST00000461383 ZNF629Q9UEG4 869 aaPredicted RBP2.19□□□□□ -2.06
VCL-203ENST00000461383 LGALS13Q9UHV8 139 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 TBC1D24Q9ULP9 559 aa2.19□□□□□ -2.06
VCL-203ENST00000461383 NFASCO94856 1347 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 DENND4AQ7Z401 1863 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 TRBV9A0A0B4J1U6 114 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 KBTBD11-OT1A0A1B0GTJ5 212 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 KRTAP4-16G5E9R7 235 aaPredicted RBP2.18□□□□□ -2.06
VCL-203ENST00000461383 TRAF3IP2O43734 574 aaPredicted RBP2.18□□□□□ -2.06
VCL-203ENST00000461383 FKBP6O75344 327 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 BGLAPP02818 100 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 FABP3P05413 133 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 SMIM10L1P0DMW3 83 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 IGHV3-43DP0DP04 118 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 CCNB1P14635 433 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 MGMTP16455 207 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 ZNF17P17021 662 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 ZNF30P17039 623 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 HRH1P35367 487 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 AQP2P41181 271 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 NAMPTP43490 491 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 NMUP48645 174 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 CYB561P49447 251 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 CSNK1EP49674 416 aaKnown RBP2.18□□□□□ -2.06
VCL-203ENST00000461383 IRX3P78415 501 aaPredicted RBP2.18□□□□□ -2.06
VCL-203ENST00000461383 PAX5Q02548 391 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 TMEM183BQ1AE95 376 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 TTLL9Q3SXZ7 439 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 PTPN20Q4JDL3 420 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 C2orf83Q53S99 150 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 VAX1Q5SQQ9 334 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 ANKRD22Q5VYY1 191 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 TMEM220Q6QAJ8 160 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 MBOAT1Q6ZNC8 495 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 LINC00173Q6ZV60 143 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 ABHD13Q7L211 337 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 C6orf120Q7Z4R8 191 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 TMEM183AQ8IXX5 376 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 JAGN1Q8N5M9 183 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 NPBQ8NG41 125 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 ACTRT1Q8TDG2 376 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 BLOC1S5Q8TDH9 187 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 TMEM158Q8WZ71 300 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 PEX13Q92968 403 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 EEF1AKMT3Q96AZ1 226 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 C8orf44Q96CB5 159 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 SMIM10Q96HG1 83 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 MICU1Q9BPX6 476 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 ACTR3CQ9C0K3 210 aaPredicted RBP2.18□□□□□ -2.06
VCL-203ENST00000461383 DNTTIP1Q9H147 329 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 CLSTN2Q9H4D0 955 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 ELOVL6Q9H5J4 265 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 BEX1Q9HBH7 125 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 TMEM165Q9HC07 324 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 RETNQ9HD89 108 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 CLN8Q9UBY8 286 aa2.18□□□□□ -2.06
VCL-203ENST00000461383 TRMT112Q9UI30 125 aaKnown RBP2.18□□□□□ -2.06
VCL-203ENST00000461383 NUP214P35658 2090 aaPredicted RBP2.18□□□□□ -2.06
VCL-203ENST00000461383 CENPJQ9HC77 1338 aaPredicted RBP2.17□□□□□ -2.06
VCL-203ENST00000461383 AKNAQ7Z591 1439 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 MTCL1Q9Y4B5 1905 aaKnown RBP2.17□□□□□ -2.06
VCL-203ENST00000461383 NKX2-6A6NCS4 301 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 M0R3G1 203 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 CHST1O43916 411 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 ZNF861PO60384 105 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 EIF4E2O60573 245 aaKnown RBP2.17□□□□□ -2.06
VCL-203ENST00000461383 SUPT3HO75486 399 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 CA11O75493 328 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 CTAG2O75638 210 aa2.17□□□□□ -2.06
VCL-203ENST00000461383 SRP72O76094 671 aaKnown RBP2.17□□□□□ -2.06
VCL-203ENST00000461383 UTS2O95399 124 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms