RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ALOX12BO75342 701 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 MPDU1O75352 247 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 UGT2B17O75795 530 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 HPP00738 406 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 HLA-AP01891 365 aaKnown RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 ATP1B1P05026 303 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 ZDHHC11BP0C7U3 371 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 C8orf88P0DMB2 117 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 UCHL3P15374 230 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 KCNE1P15382 129 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 H2AFXP16104 143 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 FUT3P21217 361 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 ARR3P36575 388 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 MAGEA12P43365 314 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 FGF8P55075 233 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR1D5P58170 312 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 HILS1P60008 231 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 NANOS2P60321 138 aaKnown RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 SEC61BP60468 96 aaKnown RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 ERVPABLB-1P60509 514 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 RHOAP61586 193 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 FLI1Q01543 452 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 ACVR1Q04771 509 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 PRKCDQ05655 676 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 ELAVL2Q12926 359 aaKnown RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 KRR1Q13601 381 aaKnown RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 RAB31Q13636 194 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 FLOT2Q14254 428 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 CTF1Q16619 201 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 HAGHQ16775 308 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 DUSP7Q16829 419 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 TIGITQ495A1 244 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 C1orf189Q5VU69 101 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 CASP12Q6UXS9 341 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 NPSR1Q6W5P4 371 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 RAD9BQ6WBX8 426 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 Q6ZT83 130 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 APTXQ7Z2E3 356 aaKnown RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 FAM19A1Q7Z5A9 133 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 DPPA2Q7Z7J5 298 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 SLC47A2Q86VL8 602 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 NRMQ8IXM6 262 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 EID3Q8N140 333 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 KIR3DL3Q8N743 410 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 RBMXL3Q8N7X1 1067 aaKnown RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR5L1Q8NGL2 311 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 WFIKKN2Q8TEU8 576 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 AENQ8WTP8 325 aaKnown RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 RASSF5Q8WWW0 418 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 MAFIPQ8WZ33 124 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 BORCS5Q969J3 196 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 NSL1Q96IY1 281 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 FAM210BQ96KR6 192 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 ZNF385AQ96PM9 386 aaKnown RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 CPXM1Q96SM3 734 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 RNF2Q99496 336 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 SDHCQ99643 169 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 DHRS9Q9BPW9 319 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 PSD2Q9BQI7 771 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 TRAF4Q9BUZ4 470 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 DDA1Q9BW61 102 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 FAIM2Q9BWQ8 316 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 RAB34Q9BZG1 259 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 UBXN6Q9BZV1 441 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 MFSD1Q9H3U5 465 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 NHEJ1Q9H9Q4 299 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 EML4Q9HC35 981 aaKnown RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 MYOZ1Q9NP98 299 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 KLHL21Q9UJP4 597 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 OARD1Q9Y530 152 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 ARL5AQ9Y689 179 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 R4GN57 208 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 PDS5AQ29RF7 1337 aaKnown RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 NUP155O75694 1391 aa3.09□□□□□ -1.92
HMGB1P12-201ENST00000438594 RFX7Q2KHR2 1363 aa3.09□□□□□ -1.92
HMGB1P12-201ENST00000438594 KIAA0232Q92628 1395 aa3.09□□□□□ -1.92
HMGB1P12-201ENST00000438594 NUP160Q12769 1436 aa3.09□□□□□ -1.92
HMGB1P12-201ENST00000438594 CECR2Q9BXF3 1484 aa3.09□□□□□ -1.92
HMGB1P12-201ENST00000438594 SPATA31D1Q6ZQQ2 1576 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 SMIM28A0A1B0GU29 152 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 A0A1W2PR80 420 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 ANKRD20A5PA0PJZ0 165 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 TSPAN11A1L157 253 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 PRR23AA6NEV1 266 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 SRRM3A6NNA2 597 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 C15orf62A8K5M9 175 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 MIF4GDA9UHW6 222 aaKnown RBP3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 DISC1C4P0D8 188 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 KPNA3O00505 521 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 CXCR6O00574 342 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 AZIN1O14977 448 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 INPP4BO15327 924 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 BIRC5O15392 142 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF749O43361 778 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 NOS1APO75052 506 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 SMIM24O75264 130 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 TRAPPC6AO75865 159 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 TDP2O95551 362 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 CATP04040 527 aaKnown RBP3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 CD74P04233 296 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms