RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 LSM5Q9Y4Y9 91 aaKnown RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 SCN3AQ9NY46 2000 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 HSPB2A8KAH6 182 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 F5H5K5 113 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 PYCARD-AS1I3L0S3 204 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 DVL2O14641 736 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF749O43361 778 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 HYAL3O43820 417 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-205ENST00000438362 EIF4E2O60573 245 aaKnown RBP6.09□□□□□ -1.43
CSDE1-205ENST00000438362 RGS11O94810 467 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 NDUFB6O95139 128 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 HOXB5P09067 269 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 CAMLGP49069 296 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF169Q14929 603 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-205ENST00000438362 SMAD2Q15796 467 aaKnown RBP6.09□□□□□ -1.43
CSDE1-205ENST00000438362 HSPB2Q16082 182 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 ACTBL2Q562R1 376 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 TMEM196Q5HYL7 178 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 C1orf140Q5VVS0 124 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 UNQ6126/PRO20091Q6UXV3 157 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 MARCH3Q86UD3 253 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 FGGYQ96C11 551 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 SCMH1Q96GD3 660 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 RNF170Q96K19 258 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 HHIPQ96QV1 700 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 SYT3Q9BQG1 590 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 TMEM59Q9BXS4 323 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 ZFP57Q9NU63 452 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 TAS2R4Q9NYW5 299 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 DHCR7Q9UBM7 475 aaKnown RBP6.09□□□□□ -1.43
CSDE1-205ENST00000438362 EDARQ9UNE0 448 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF638Q14966 1978 aaKnown RBP6.09□□□□□ -1.43
CSDE1-205ENST00000438362 OTOFQ9HC10 1997 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 ALPK2Q86TB3 2170 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 A0A0B4J2A0 478 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 CCSO14618 274 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 LANCL1O43813 399 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 PRICKLE3O43900 615 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-205ENST00000438362 NSA2O95478 260 aaKnown RBP6.09□□□□□ -1.43
CSDE1-205ENST00000438362 IGHG1P01857 330 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 CD1CP29017 333 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 PPICP45877 212 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 DUSP2Q05923 314 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 RSU1Q15404 277 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 ACKR1Q16570 336 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 CDONQ4KMG0 1287 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 PLA1AQ53H76 456 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 ELFN2Q5R3F8 820 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 RAET1LQ5VY80 246 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 C3orf33Q6P1S2 294 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 CD200R1LQ6Q8B3 271 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 C19orf48Q6RUI8 117 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 ABI3BPQ7Z7G0 1075 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 OR4D9Q8NGE8 314 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 RAB3CQ96E17 227 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF681Q96N22 645 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 MICU1Q9BPX6 476 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 NUDT22Q9BRQ3 303 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 NAA11Q9BSU3 229 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-205ENST00000438362 SLC5A7Q9GZV3 580 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 ACKR4Q9NPB9 350 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 PLEKHJ1Q9NW61 149 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 SHPKQ9UHJ6 478 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 KCNG2Q9UJ96 466 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 ING1Q9UK53 422 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-205ENST00000438362 SLC22A13Q9Y226 551 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 COA3Q9Y2R0 106 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-205ENST00000438362 SBF1O95248 1867 aa6.09□□□□□ -1.43
CSDE1-205ENST00000438362 PRAMEF27A3QJZ7 478 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 OR6C68A6NDL8 312 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 TMEM235A6NFC5 223 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 PRKNO60260 465 aaPredicted RBP6.09□□□□□ -1.44
CSDE1-205ENST00000438362 MOSPD3O75425 235 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 OR2F2O95006 317 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 ACSM4P0C7M7 580 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 ACHEP22303 614 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 CD38P28907 300 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 DHPSP49366 369 aaPredicted RBP6.09□□□□□ -1.44
CSDE1-205ENST00000438362 C19orf57Q0VDD7 668 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 PMPCAQ10713 525 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 OR2F1Q13607 317 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 RHEBQ15382 184 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 LRRC69Q6ZNQ3 347 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 PRSS41Q7RTY9 318 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 DCXRQ7Z4W1 244 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 KDM8Q8N371 416 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 ZBTB44Q8NCP5 570 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 OR56B1Q8NGI3 324 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 OR5M1Q8NGP8 315 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 OR4C3Q8NH37 302 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 KCNG3Q8TAE7 436 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 MARC2Q969Z3 335 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 UBL7Q96S82 380 aaPredicted RBP6.09□□□□□ -1.44
CSDE1-205ENST00000438362 KCNJ15Q99712 375 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 PBDC1Q9BVG4 233 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 RBM24Q9BX46 236 aaKnown RBP6.09□□□□□ -1.44
CSDE1-205ENST00000438362 PIGMQ9H3S5 423 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 NARFLQ9H6Q4 476 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 DNAJB12Q9NXW2 375 aaKnown RBP6.09□□□□□ -1.44
CSDE1-205ENST00000438362 EHFQ9NZC4 300 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms