RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 KIAA1210Q9ULL0 1709 aa4.41□□□□□ -1.7
HMGB3P10-201ENST00000434734 ANKRD30BQ9BXX2 1392 aa4.4□□□□□ -1.7
HMGB3P10-201ENST00000434734 A0A1W2PR80 420 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 K7EMT4 169 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 CDC7O00311 574 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 FGF16O43320 207 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 TGOLN2O43493 480 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 DENRO43583 198 aaKnown RBP4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 MPZL2O60487 215 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 C1QL1O75973 258 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 IGHV2-5P01817 119 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 C2P06681 752 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 MYOGP15173 224 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 CFL1P23528 166 aaKnown RBP4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 RFX2P48378 723 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 CSRP3P50461 194 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 CLDN12P56749 244 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 SP4Q02446 784 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 CKAP4Q07065 602 aaKnown RBP4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 C2orf54Q08AI8 447 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 DLG1Q12959 904 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 RAB31Q13636 194 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 DAZAP2Q15038 168 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 PSMD5Q16401 504 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 PGGHGQ32M88 737 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 BSXQ3C1V8 233 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 TECRLQ5HYJ1 363 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 OR10J3Q5JRS4 329 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 IRAK1BP1Q5VVH5 260 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 SPOPLQ6IQ16 392 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 TRIM40Q6P9F5 258 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 CRIP3Q6Q6R5 217 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 FRRS1Q6ZNA5 592 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 Q6ZT83 130 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 SSX7Q7RTT5 188 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 CEACAM19Q7Z692 300 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 PIP4P1Q86T03 277 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 WDFY1Q8IWB7 410 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 PIANPQ8IYJ0 282 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 VKORC1L1Q8N0U8 176 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 ATP6V1C2Q8NEY4 427 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 OR4D10Q8NGI6 311 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 OR6K6Q8NGW6 343 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 OR5AK3PQ8NH89 298 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 OR2T6Q8NHC8 308 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 RFESDQ8TAC1 157 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 SFXN5Q8TD22 340 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 TMED6Q8WW62 240 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 FGF11Q92914 225 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 PTH2Q96A98 100 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 SGTBQ96EQ0 304 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 TMA16Q96EY4 203 aaKnown RBP4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 CCDC42Q96M95 316 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 RCHY1Q96PM5 261 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 SORT1Q99523 831 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 FOXC2Q99958 501 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 MRPL45Q9BRJ2 306 aaKnown RBP4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 HCAR1Q9BXC0 346 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 PPDPFQ9H3Y8 114 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 RNF41Q9H4P4 317 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 IL1RAPQ9NPH3 570 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 CTPS2Q9NRF8 586 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 RPL36Q9Y3U8 105 aaKnown RBP4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 CPQQ9Y646 472 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 HS3ST3B1Q9Y662 390 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 RLFQ13129 1914 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 CGNL1Q0VF96 1302 aa4.4□□□□□ -1.71
HMGB3P10-201ENST00000434734 IGHV4-61A0A0C4DH41 118 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 TRBV5-4A0A0C4DH59 114 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 ANKRD20A5PA0PJZ0 165 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 EFCAB7A8K855 629 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 HIDE1A8MVS5 230 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 F5H5T6 163 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 M0QZ92 97 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 MAGEB4O15481 346 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 TYROBPO43914 113 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 SHOX2O60902 331 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 IGHV4-59P01825 116 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 TCRBP04435 133 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 HOXC4P09017 264 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 CD1DP15813 335 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 IGFBP3P17936 291 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 GABRG2P18507 467 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 BCL3P20749 454 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 MSNP26038 577 aaKnown RBP4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 CALML3P27482 149 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 IL12AP29459 219 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 GDF5P43026 501 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 TFPI2P48307 235 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 IDH2P48735 452 aaKnown RBP4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 PTH2RP49190 550 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 ATP4BP51164 291 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 SSR4P51571 173 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 PROK1P58294 105 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 RHOAP61586 193 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 Q0VFX4 171 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 FOXF2Q12947 444 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 ASAH1Q13510 395 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 FLOT2Q14254 428 aa4.39□□□□□ -1.71
HMGB3P10-201ENST00000434734 ALX1Q15699 326 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms