RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 GATAD1Q8WUU5 269 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 CNOT9Q92600 299 aaKnown RBP5.19□□□□□ -1.58
SDCBP-203ENST00000424270 ZNF75AQ96N20 296 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 OR2V2Q96R30 315 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 KCNA7Q96RP8 456 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 DDOQ99489 341 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 MEGF9Q9H1U4 602 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 LZTFL1Q9NQ48 299 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 RRAGDQ9NQL2 400 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-203ENST00000424270 EXOSC3Q9NQT5 275 aaKnown RBP5.19□□□□□ -1.58
SDCBP-203ENST00000424270 KCNE5Q9UJ90 142 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 NDRG4Q9ULP0 352 aaKnown RBP5.19□□□□□ -1.58
SDCBP-203ENST00000424270 STK38LQ9Y2H1 464 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 A0A1B0GVI7 797 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 C5orf49A4QMS7 147 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 CLDN24A6NM45 220 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 ADARB2-AS1A8MUL3 147 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 IFNL4K9M1U5 179 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 AIM2O14862 343 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 NPFFO15130 113 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 RAMP3O60896 148 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 MFN2O95140 757 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 LY86O95711 162 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 ENO1P06733 434 aaKnown RBP5.18□□□□□ -1.58
SDCBP-203ENST00000424270 ADH4P08319 380 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 TAC1P20366 129 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 PTMSP20962 102 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 HSD17B3P37058 310 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 NPY4RP50391 375 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 GDI2P50395 445 aaKnown RBP5.18□□□□□ -1.58
SDCBP-203ENST00000424270 P2RY4P51582 365 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 RAB25P57735 213 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 PPP1CBP62140 327 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 PRB3Q04118 309 aaPredicted RBP5.18□□□□□ -1.58
SDCBP-203ENST00000424270 LSM12Q3MHD2 195 aaKnown RBP5.18□□□□□ -1.58
SDCBP-203ENST00000424270 LYPD2Q6UXB3 125 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 NHLRC1Q6VVB1 395 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 SATL1Q86VE3 508 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 CMTM4Q8IZR5 234 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 TMEM123Q8N131 208 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 BOLLQ8N9W6 283 aaKnown RBP5.18□□□□□ -1.58
SDCBP-203ENST00000424270 FAM71CQ8NEG0 241 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 FGFBP3Q8TAT2 258 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 SLC7A13Q8TCU3 470 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 NPRL2Q8WTW4 380 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 XAGE5Q8WWM1 108 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 DACT3Q96B18 629 aaPredicted RBP5.18□□□□□ -1.58
SDCBP-203ENST00000424270 MOAP1Q96BY2 351 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 SLC35G5Q96KT7 338 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 SIGLEC11Q96RL6 698 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 SSX3Q99909 188 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 ZNF649Q9BS31 505 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 SPATA9Q9BWV2 254 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 CCNB1IP1Q9NPC3 277 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 SIRT7Q9NRC8 400 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 INPP5EQ9NRR6 644 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 SIRT5Q9NXA8 310 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 ZNF224Q9NZL3 707 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 IL19Q9UHD0 177 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 MAB21L2Q9Y586 359 aa5.18□□□□□ -1.58
SDCBP-203ENST00000424270 DNAH3Q8TD57 4116 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 HMX2A2RU54 273 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 FAM159BA6NKW6 160 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 A8MT66 165 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 H0YHG0 523 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 M0R082 166 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 F2RL2O00254 374 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 SLC28A1O00337 649 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 C6orf47O95873 294 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 ALDOBP05062 364 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 G6PDP11413 515 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 MMP9P14780 707 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 GSTM3P21266 225 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 PAICSP22234 425 aaKnown RBP5.17□□□□□ -1.58
SDCBP-203ENST00000424270 AHCYP23526 432 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 STOMP27105 288 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 CHATP28329 748 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 ECI1P42126 302 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 ACAA2P42765 397 aaKnown RBP5.17□□□□□ -1.58
SDCBP-203ENST00000424270 VDAC2P45880 294 aaPredicted RBP5.17□□□□□ -1.58
SDCBP-203ENST00000424270 SRP9P49458 86 aaKnown RBP5.17□□□□□ -1.58
SDCBP-203ENST00000424270 GUCY2DQ02846 1103 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 GSTA3Q16772 222 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 ZNF404Q494X3 552 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 EXOSC6Q5RKV6 272 aaKnown RBP5.17□□□□□ -1.58
SDCBP-203ENST00000424270 IL23RQ5VWK5 629 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 MBNL2Q5VZF2 373 aaKnown RBP5.17□□□□□ -1.58
SDCBP-203ENST00000424270 WBP2NLQ6ICG8 309 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 ARL9Q6T311 187 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 DCDC5Q6ZRR9 648 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 DPPA2Q7Z7J5 298 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 MOGAT3Q86VF5 341 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 ZNF101Q8IZC7 436 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 LRRC18Q8N456 261 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 C10orf53Q8N6V4 93 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 C19orf18Q8NEA5 215 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 OR5AU1Q8NGC0 362 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 OR4K5Q8NGD3 323 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 MFSD8Q8NHS3 518 aa5.17□□□□□ -1.58
SDCBP-203ENST00000424270 ZNF417Q8TAU3 575 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms