RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 MPV17P39210 176 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 CRATP43155 626 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 PITPNBP48739 271 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 GDI2P50395 445 aaKnown RBP1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 ARHGDIAP52565 204 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 CRISP3P54108 245 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 BIDP55957 195 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 PCBP3P57721 371 aaKnown RBP1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 PPP1CBP62140 327 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC7A5Q01650 507 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 COL10A1Q03692 680 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 HSF2Q03933 536 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 EMX1Q04741 257 aaPredicted RBP1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 CD69Q07108 199 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 PUDPQ08623 228 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 CDK5R2Q13319 367 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 DCTN2Q13561 401 aaKnown RBP1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 SYPL1Q16563 259 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 SMU1Q2TAY7 513 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 MS4A18Q3C1V0 323 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 UGT3A2Q3SY77 523 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 SPRNQ5BIV9 151 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 MTX3Q5HYI7 312 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 ALG10BQ5I7T1 473 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 PABPC1L2AQ5JQF8 200 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 SPATA46Q5T0L3 261 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 RNF220Q5VTB9 566 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 METTL11BQ5VVY1 283 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 FOXB2Q5VYV0 432 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 CD276Q5ZPR3 534 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 KANK2Q63ZY3 851 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 WDR25Q64LD2 544 aaPredicted RBP1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC35E4Q6ICL7 350 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF774Q6NX45 483 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 LRFN4Q6PJG9 635 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 ARL9Q6T311 187 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 CCBE1Q6UXH8 406 aaPredicted RBP1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 NHLRC1Q6VVB1 395 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 WDR88Q6ZMY6 472 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF836Q6ZNA1 936 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 PXKQ7Z7A4 578 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 ANKRD46Q86W74 232 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 VRK2Q86Y07 508 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 LDLRAD3Q86YD5 345 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 C10orf107Q8IVU9 208 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 LRRC34Q8IZ02 419 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 ALDH16A1Q8IZ83 802 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF101Q8IZC7 436 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 C1orf87Q8N0U7 546 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 CLIP4Q8N3C7 705 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 FITM2Q8N6M3 262 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 C10orf53Q8N6V4 93 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 TRIML2Q8N7C3 387 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 C11orf44Q8N8P7 122 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 DTX3Q8N9I9 347 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 SCAIQ8N9R8 606 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 PNLDC1Q8NA58 520 aaKnown RBP1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 SCCPDHQ8NBX0 429 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR2Z1Q8NG97 314 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR4F17Q8NGA8 305 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR4K5Q8NGD3 323 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR8J2Q8NGG1 315 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR6S1Q8NH40 331 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR6X1Q8NH79 312 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 FGFBP3Q8TAT2 258 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 ABHD4Q8TB40 342 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC25A40Q8TBP6 338 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 DNAJA4Q8WW22 397 aaPredicted RBP1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 IPCEF1Q8WWN9 437 aaPredicted RBP1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 CFHR4Q92496 578 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 TMEM54Q969K7 222 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 TAAR8Q969N4 342 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC35B4Q969S0 331 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF566Q969W8 418 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 DACT3Q96B18 629 aaPredicted RBP1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 PHF21AQ96BD5 680 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 R3HDM4Q96D70 268 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC41A3Q96GZ6 507 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC25A44Q96H78 314 aaPredicted RBP1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 POM121L2Q96KW2 1035 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 C3orf30Q96M34 536 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR4F4Q96R69 305 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 PANX1Q96RD7 426 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 SIGLEC11Q96RL6 698 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 FMO2Q99518 471 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 SH3GL3Q99963 347 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 RHOXF2Q9BQY4 288 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 NUDT16L1Q9BRJ7 211 aaKnown RBP1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC35A5Q9BS91 424 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 C1orf50Q9BV19 199 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 SPATA9Q9BWV2 254 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 ASPNQ9BXN1 380 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR2J1Q9GZK6 312 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 KCNN2Q9H2S1 579 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 CENPHQ9H3R5 247 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 C12orf10Q9HB07 376 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 MSL2Q9HCI7 577 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 CCNB1IP1Q9NPC3 277 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 MAN2C1Q9NTJ4 1040 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 DCAF16Q9NXF7 216 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms