RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 SLC35D2Q76EJ3 337 aa23.07■■□□□ 1.28
COL13A1-203ENST00000398969 FAM3DQ96BQ1 224 aa23.07■■□□□ 1.28
COL13A1-203ENST00000398969 FOXN4Q96NZ1 517 aa23.07■■□□□ 1.28
COL13A1-203ENST00000398969 KNL1Q8NG31 2342 aa23.07■■□□□ 1.28
COL13A1-203ENST00000398969 IGHV1OR15-9A0A0B4J2B8 117 aa23.07■■□□□ 1.28
COL13A1-203ENST00000398969 hCG_1807616A0A1W2PRN6 198 aa23.07■■□□□ 1.28
COL13A1-203ENST00000398969 MEIS3P1A6NDR6 274 aa23.07■■□□□ 1.28
COL13A1-203ENST00000398969 SOX1O00570 391 aaPredicted RBP23.07■■□□□ 1.28
COL13A1-203ENST00000398969 HLA-DQA2P01906 255 aa23.07■■□□□ 1.28
COL13A1-203ENST00000398969 AKAIN1P0CW23 69 aa23.07■■□□□ 1.28
COL13A1-203ENST00000398969 GTF2F2P13984 249 aa23.07■■□□□ 1.28
COL13A1-203ENST00000398969 OC90Q02509 493 aaPredicted RBP23.07■■□□□ 1.28
COL13A1-203ENST00000398969 HLXQ14774 488 aaPredicted RBP23.07■■□□□ 1.28
COL13A1-203ENST00000398969 SFRP5Q5T4F7 317 aa23.07■■□□□ 1.28
COL13A1-203ENST00000398969 ASPHD2Q6ICH7 369 aa23.07■■□□□ 1.28
COL13A1-203ENST00000398969 TMEM151BQ8IW70 566 aa23.07■■□□□ 1.28
COL13A1-203ENST00000398969 OR51S1Q8NGJ8 323 aa23.07■■□□□ 1.28
COL13A1-203ENST00000398969 ADIPOR1Q96A54 375 aa23.07■■□□□ 1.28
COL13A1-203ENST00000398969 MRTO4Q9UKD2 239 aaKnown RBP23.07■■□□□ 1.28
COL13A1-203ENST00000398969 B9D1Q9UPM9 204 aa23.07■■□□□ 1.28
COL13A1-203ENST00000398969 SLC22A13Q9Y226 551 aa23.07■■□□□ 1.28
COL13A1-203ENST00000398969 GON4LQ3T8J9 2241 aa23.07■■□□□ 1.28
COL13A1-203ENST00000398969 TRAV36DV7A0A075B6V5 113 aa23.06■■□□□ 1.28
COL13A1-203ENST00000398969 HMSDA8MTL9 139 aa23.06■■□□□ 1.28
COL13A1-203ENST00000398969 SLC17A2O00624 439 aa23.06■■□□□ 1.28
COL13A1-203ENST00000398969 ARPC5O15511 151 aa23.06■■□□□ 1.28
COL13A1-203ENST00000398969 CDC40O60508 579 aaKnown RBP eCLIP23.06■■□□□ 1.28
COL13A1-203ENST00000398969 S100A11P31949 105 aa23.06■■□□□ 1.28
COL13A1-203ENST00000398969 UBE2MP61081 183 aaKnown RBP23.06■■□□□ 1.28
COL13A1-203ENST00000398969 UBXN2BQ14CS0 331 aa23.06■■□□□ 1.28
COL13A1-203ENST00000398969 PTCRAQ6ISU1 281 aaPredicted RBP23.06■■□□□ 1.28
COL13A1-203ENST00000398969 MUC20Q8N307 709 aaPredicted RBP23.06■■□□□ 1.28
COL13A1-203ENST00000398969 OR2AK2Q8NG84 335 aa23.06■■□□□ 1.28
COL13A1-203ENST00000398969 KLHDC7BQ96G42 594 aa23.06■■□□□ 1.28
COL13A1-203ENST00000398969 GAL3ST4Q96RP7 486 aa23.06■■□□□ 1.28
COL13A1-203ENST00000398969 LOC100289279A0A1B0GTE1 492 aa23.06■■□□□ 1.28
COL13A1-203ENST00000398969 PLGP00747 810 aaPredicted RBP23.06■■□□□ 1.28
COL13A1-203ENST00000398969 ZNF35P13682 527 aa23.06■■□□□ 1.28
COL13A1-203ENST00000398969 POU3F2P20265 443 aaPredicted RBP23.06■■□□□ 1.28
COL13A1-203ENST00000398969 FASLGP48023 281 aa23.06■■□□□ 1.28
COL13A1-203ENST00000398969 GFERP55789 205 aa23.06■■□□□ 1.28
COL13A1-203ENST00000398969 METTL21AQ8WXB1 218 aa23.06■■□□□ 1.28
COL13A1-203ENST00000398969 TSLPQ969D9 159 aa23.06■■□□□ 1.28
COL13A1-203ENST00000398969 REG4Q9BYZ8 158 aa23.06■■□□□ 1.28
COL13A1-203ENST00000398969 IGHV5-51A0A0C4DH38 117 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 RAD1O60671 282 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 WISP1O95388 367 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 PNPP00491 289 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 IGKV3-11P04433 115 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 PRSS3P35030 304 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 CENPAP49450 140 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 FAM166AQ6J272 317 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 ZNF679Q8IYX0 411 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 SREK1IP1Q8N9Q2 155 aaPredicted RBP23.05■■□□□ 1.28
COL13A1-203ENST00000398969 ASB17Q8WXJ9 295 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 A0A1W2PPC1 479 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 PRSS37A4D1T9 235 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 GOSR2O14653 212 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 PPM1FP49593 454 aaPredicted RBP23.05■■□□□ 1.28
COL13A1-203ENST00000398969 TEX30Q5JUR7 227 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 TMUB2Q71RG4 321 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.05■■□□□ 1.28
COL13A1-203ENST00000398969 RNF128Q8TEB7 428 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 PPP1R14AQ96A00 147 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 TGM7Q96PF1 710 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 SLC17A5Q9NRA2 495 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 COQ3Q9NZJ6 369 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 GTF2A1LQ9UNN4 478 aa23.05■■□□□ 1.28
COL13A1-203ENST00000398969 MRPS17Q9Y2R5 130 aaKnown RBP23.05■■□□□ 1.28
COL13A1-203ENST00000398969 FITM1A5D6W6 292 aa23.04■■□□□ 1.28
COL13A1-203ENST00000398969 TMEM150CB9EJG8 249 aa23.04■■□□□ 1.28
COL13A1-203ENST00000398969 F5H5P2 479 aa23.04■■□□□ 1.28
COL13A1-203ENST00000398969 CD3DP04234 171 aa23.04■■□□□ 1.28
COL13A1-203ENST00000398969 ACKR1Q16570 336 aa23.04■■□□□ 1.28
COL13A1-203ENST00000398969 OR7E24Q6IFN5 339 aa23.04■■□□□ 1.28
COL13A1-203ENST00000398969 MAMDC2Q7Z304 686 aaPredicted RBP23.04■■□□□ 1.28
COL13A1-203ENST00000398969 MARCH3Q86UD3 253 aa23.04■■□□□ 1.28
COL13A1-203ENST00000398969 SPERTQ8NA61 448 aa23.04■■□□□ 1.28
COL13A1-203ENST00000398969 CLEC1AQ8NC01 280 aa23.04■■□□□ 1.28
COL13A1-203ENST00000398969 ZNF721Q8TF20 911 aa23.04■■□□□ 1.28
COL13A1-203ENST00000398969 SLC25A36Q96CQ1 311 aa23.04■■□□□ 1.28
COL13A1-203ENST00000398969 SLC38A3Q99624 504 aa23.04■■□□□ 1.28
COL13A1-203ENST00000398969 PTDSS2Q9BVG9 487 aa23.04■■□□□ 1.28
COL13A1-203ENST00000398969 NRSN2Q9GZP1 204 aa23.04■■□□□ 1.28
COL13A1-203ENST00000398969 MRPL22Q9NWU5 206 aaKnown RBP23.04■■□□□ 1.28
COL13A1-203ENST00000398969 SDHAF2Q9NX18 166 aa23.04■■□□□ 1.28
COL13A1-203ENST00000398969 COLQQ9Y215 455 aaPredicted RBP23.04■■□□□ 1.28
COL13A1-203ENST00000398969 TMEM272A0A1B0GTI8 110 aa23.03■■□□□ 1.28
COL13A1-203ENST00000398969 CDC14CA4D256 554 aa23.03■■□□□ 1.28
COL13A1-203ENST00000398969 TTLL8A6PVC2 850 aa23.03■■□□□ 1.28
COL13A1-203ENST00000398969 RP2O75695 350 aa23.03■■□□□ 1.28
COL13A1-203ENST00000398969 B3GALNT1O75752 331 aa23.03■■□□□ 1.28
COL13A1-203ENST00000398969 DDAH2O95865 285 aa23.03■■□□□ 1.28
COL13A1-203ENST00000398969 FCER2P06734 321 aa23.03■■□□□ 1.28
COL13A1-203ENST00000398969 DCAF12L2Q5VW00 463 aa23.03■■□□□ 1.28
COL13A1-203ENST00000398969 SLC18B1Q6NT16 456 aa23.03■■□□□ 1.28
COL13A1-203ENST00000398969 GALNT11Q8NCW6 608 aa23.03■■□□□ 1.28
COL13A1-203ENST00000398969 ZNF519Q8TB69 540 aa23.03■■□□□ 1.28
COL13A1-203ENST00000398969 DVL3Q92997 716 aaPredicted RBP23.03■■□□□ 1.28
COL13A1-203ENST00000398969 NKX3-1Q99801 234 aaPredicted RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms