RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 TRAV8-7A0A075B6U6 113 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 LNP1A1A4G5 178 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 SC5DO75845 299 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 TXNDC12O95881 172 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 CFL1P23528 166 aaKnown RBP9.99□□□□□ -0.81
TCOF1-203ENST00000394269 PCOLCEQ15113 449 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 TBRG1Q3YBR2 411 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 Q499Y3 187 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 WDR38Q5JTN6 314 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 ZNF468Q5VIY5 522 aaPredicted RBP9.99□□□□□ -0.81
TCOF1-203ENST00000394269 RPS19BP1Q86WX3 136 aaKnown RBP9.99□□□□□ -0.81
TCOF1-203ENST00000394269 OR11G2Q8NGC1 345 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 SETD6Q8TBK2 473 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 CAPSLQ8WWF8 208 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 LOXL2Q9Y4K0 774 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 V9GY05 133 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 EPG5Q9HCE0 2579 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 HTR3EA5X5Y0 456 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 SULT2B1O00204 365 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 GATBO75879 557 aaKnown RBP9.98□□□□□ -0.81
TCOF1-203ENST00000394269 HSF2Q03933 536 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 DCAF12Q5T6F0 453 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 SLC23A3Q6PIS1 610 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 COMMD2Q86X83 199 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 PRSS35Q8N3Z0 413 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 OR10H5Q8NGA6 315 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 STK35Q8TDR2 534 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 TTC9Q92623 222 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 RBP7Q96R05 134 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 IER2Q9BTL4 223 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 KCNK15Q9H427 330 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 RNF121Q9H920 327 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 CHST11Q9NPF2 352 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 HPF1Q9NWY4 346 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 FKBP7Q9Y680 259 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 POLEQ07864 2286 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 TPD52L2O43399 206 aaKnown RBP9.98□□□□□ -0.81
TCOF1-203ENST00000394269 GPRIN2O60269 458 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 SLC2A1P11166 492 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 CD53P19397 219 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 NPR2P20594 1047 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 GALP22466 123 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 ASAH1Q13510 395 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 YIF1BQ5BJH7 314 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 METAP1DQ6UB28 335 aaPredicted RBP9.98□□□□□ -0.81
TCOF1-203ENST00000394269 STAC2Q6ZMT1 411 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 MAMSTRQ6ZN01 415 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 NDUFAF7Q7L592 441 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 RAB11FIP2Q7L804 512 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 CMTM4Q8IZR5 234 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 TOMM5Q8N4H5 51 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 BMPERQ8N8U9 685 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 WDSUB1Q8N9V3 476 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 PLPP7Q8NBV4 271 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 EMC7Q9NPA0 242 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 MRPL39Q9NYK5 338 aaKnown RBP9.98□□□□□ -0.81
TCOF1-203ENST00000394269 DCDC2BA2VCK2 349 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 IFITM5A6NNB3 132 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 FTCDNL1E5RQL4 147 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 ADAM10O14672 748 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 SEC14L5O43304 696 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 TRAPPC6AO75865 159 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 DPP4P27487 766 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 CRABP1P29762 137 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 DNASE1L1P49184 302 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 PRKXP51817 358 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 CLRN1P58418 232 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 MRPS15P82914 257 aaKnown RBP9.98□□□□□ -0.81
TCOF1-203ENST00000394269 MFGE8Q08431 387 aaPredicted RBP9.98□□□□□ -0.81
TCOF1-203ENST00000394269 TATDN3Q17R31 274 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 PLPPR5Q32ZL2 321 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 FAM198BQ6UWH4 519 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 KCTD20Q7Z5Y7 419 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 UEVLDQ8IX04 471 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 ZNF519Q8TB69 540 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 GPR148Q8TDV2 347 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 MAP6Q96JE9 813 aa9.98□□□□□ -0.81
TCOF1-203ENST00000394269 CDV3Q9UKY7 258 aaKnown RBP9.98□□□□□ -0.81
TCOF1-203ENST00000394269 IGHV1-45A0A0A0MS14 117 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 ZNF814B7Z6K7 855 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 NTN3O00634 580 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-203ENST00000394269 SLC43A1O75387 559 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 ZNF43P17038 809 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 RFC3P40938 356 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 CAPZA2P47755 286 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 RIDAP52758 137 aaKnown RBP9.97□□□□□ -0.81
TCOF1-203ENST00000394269 GALK2Q01415 458 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 ZFP36L1Q07352 338 aaKnown RBP9.97□□□□□ -0.81
TCOF1-203ENST00000394269 MFAP5Q13361 173 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 SLC17A1Q14916 467 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 ANGPT1Q15389 498 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 STPG1Q5TH74 334 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 ZNF544Q6NX49 715 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 KCTD18Q6PI47 426 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-203ENST00000394269 SLC7A5P1Q8MH63 180 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 POC1BQ8TC44 478 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 FYTTD1Q96QD9 318 aaKnown RBP9.97□□□□□ -0.81
TCOF1-203ENST00000394269 AUNIPQ9H7T9 357 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 MCUBQ9NWR8 336 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 BOLA1Q9Y3E2 137 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms