RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 IGFBP4P22692 258 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 GJA4P35212 333 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 SLC26A5P58743 744 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 ELOCQ15369 112 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 SLC36A2Q495M3 483 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 ZNF626Q68DY1 528 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 DMKNQ6E0U4 476 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 LPCAT3Q6P1A2 487 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 TMPRSS11FQ6ZWK6 438 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 OR4N2Q8NGD1 307 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 OR14K1Q8NGZ2 314 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 RAB3CQ96E17 227 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 PLEKHJ1Q9NW61 149 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 KCNG2Q9UJ96 466 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 ZNF175Q9Y473 711 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 RFPL4AA6NLU0 287 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 VSTM2BA6NLU5 285 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 RFPL4AL1F8VTS6 287 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 GABRR1P24046 479 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 RAB38P57729 211 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 ZNF77Q15935 545 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 Q6ZSR6 202 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 SPICQ8N5J4 248 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 BVESQ8NE79 360 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 CYP8B1Q9UNU6 501 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 UBE2J1Q9Y385 318 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 HCFC2Q9Y5Z7 792 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 RNF215Q9Y6U7 377 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 POLR2AP24928 1970 aaKnown RBP11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 XIRP1Q702N8 1843 aaKnown RBP11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 SHISA3A0PJX4 238 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 OR2W5A6NFC9 320 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 TMEM200CA6NKL6 621 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 OR2T1O43869 369 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 GLSO94925 669 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 ZNF16P17020 682 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 HNRNPA2B1P22626 353 aaKnown RBP11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 PSMB6P28072 239 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 SLC6A8P48029 635 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 SERTAD2Q14140 314 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 PPA1Q15181 289 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 LAMTOR1Q6IAA8 161 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 KCNJ15Q99712 375 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 NRSN2Q9GZP1 204 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 ZFP64Q9NPA5 681 aa11.99□□□□□ -0.49
TRAPPC9-201ENST00000389328 SERPINA2P20848 420 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 TBXA2RP21731 343 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 CCNOP22674 350 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 IAH1Q2TAA2 248 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 SEZ6L2Q6UXD5 910 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 FJX1Q86VR8 437 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 BAP18Q8IXM2 172 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 SUMF2Q8NBJ7 301 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 SNIP1Q8TAD8 396 aaKnown RBP11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 ZNF296Q8WUU4 475 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 SPACA5Q96QH8 159 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 CNTNAP3Q9BZ76 1288 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 TCEAL2Q9H3H9 227 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 MRPS18AQ9NVS2 196 aaKnown RBP11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 BAMBIQ13145 260 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 KLF9Q13886 244 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 OR2W3Q7Z3T1 314 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 OR1M1Q8NGA1 313 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 PATE1Q8WXA2 126 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 FAM3CQ92520 227 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 ZNF75AQ96N20 296 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 HDAC8Q9BY41 377 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 ENKD1Q9H0I2 346 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 CCDC86Q9H6F5 360 aaKnown RBP11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 IFT22Q9H7X7 185 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 POLMQ9NP87 494 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 ACAD8Q9UKU7 415 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 TTLL8A6PVC2 850 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 GPR31O00270 319 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 RAD51DO75771 328 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 OR14A16Q8NHC5 309 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 CCL4L1Q8NHW4 92 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 VN1R3Q9BXE9 311 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 ZNF442Q9H7R0 627 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 NDRG3Q9UGV2 375 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 TCRBV21S2A2A0A5A6 115 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 H0Y8X5 98 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 CTGFP29279 349 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 OR1D4P47884 311 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 OR2B8PP59922 312 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 NKX6-1P78426 367 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 DOC2BQ14184 412 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 ELFN2Q5R3F8 820 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 MDGA2Q7Z553 956 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 FRMD1Q8N878 549 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 HSD17B11Q8NBQ5 300 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 TMEM59Q9BXS4 323 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 LUZP4Q9P127 313 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 MTFP1Q9UDX5 166 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 ZNF346Q9UL40 294 aaKnown RBP11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 SLC22A7Q9Y694 548 aa11.98□□□□□ -0.49
TRAPPC9-201ENST00000389328 OR6C68A6NDL8 312 aa11.97□□□□□ -0.49
TRAPPC9-201ENST00000389328 MPC2O95563 127 aa11.97□□□□□ -0.49
TRAPPC9-201ENST00000389328 SLC2A1P11166 492 aa11.97□□□□□ -0.49
TRAPPC9-201ENST00000389328 SFTPDP35247 375 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms