RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 EXOSC3Q9NQT5 275 aaKnown RBP14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 TACSTD2P09758 323 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 SDHAP31040 664 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 SORDQ00796 357 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 PLPP7Q8NBV4 271 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 OR2AK2Q8NG84 335 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 TNFAIP8L1Q8WVP5 186 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 ST8SIA4Q92187 359 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 MESP1Q9BRJ9 268 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 PHF7Q9BWX1 381 aaPredicted RBP14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 RTN4RQ9BZR6 473 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 SLC2A4RGQ9NR83 387 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 CUTCQ9NTM9 273 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 ZNF230Q9UIE0 474 aaPredicted RBP14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 SLC22A13Q9Y226 551 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 HIF3AQ9Y2N7 669 aa14.69□□□□□ -0.06
NKX3-1-201ENST00000380871 ZNF217O75362 1048 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 CCKBRP32239 447 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 NR0B1P51843 470 aaKnown RBP14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 DLX5P56178 289 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 WDR38Q5JTN6 314 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 C1QL3Q5VWW1 255 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 ASPHD2Q6ICH7 369 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 C11orf88Q6PI97 169 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 ZNF227Q86WZ6 799 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 PM20D2Q8IYS1 436 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 DUSP19Q8WTR2 217 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 PMEPA1Q969W9 287 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 GPX7Q96SL4 187 aaPredicted RBP14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 SLC7A5P2Q9GIP4 190 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 ZMAT3Q9HA38 289 aaKnown RBP14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 GRHPRQ9UBQ7 328 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 STEAP1Q9UHE8 339 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 GPR160Q9UJ42 338 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 ETV7Q9Y603 341 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 WDFY3Q8IZQ1 3526 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 ASCC3Q8N3C0 2202 aaKnown RBP14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 C2orf72A6NCS6 295 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 PLGP00747 810 aaPredicted RBP14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 GABRA1P14867 456 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 MRPS10P82664 201 aaKnown RBP14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 ZMYND11Q15326 602 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 NSDHLQ15738 373 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 C4orf46Q504U0 113 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 KCTD20Q7Z5Y7 419 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 ATG4DQ86TL0 474 aaPredicted RBP14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 ARHGEF39Q8N4T4 335 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 TSEN15Q8WW01 171 aaKnown RBP14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 SLC25A36Q96CQ1 311 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 G6PC3Q9BUM1 346 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 UBE2ZQ9H832 354 aaPredicted RBP14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 UBE2QL1A1L167 161 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 OR6C65A6NJZ3 312 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 C11orf98E9PRG8 122 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 F5H5P2 479 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 WNT11O96014 354 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 RLN2P04090 185 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 DCNP07585 359 aaKnown RBP14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 MECP2P51608 486 aaKnown RBP14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 TMEM205Q6UW68 189 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 HDDC2Q7Z4H3 204 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 TMPRSS13Q9BYE2 586 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 C12orf4Q9NQ89 552 aa14.68□□□□□ -0.06
NKX3-1-201ENST00000380871 TRBV5-7A0A0A0MS05 114 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 HCRTR2O43614 444 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 ZNF254O75437 659 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 MAPK3P27361 379 aaPredicted RBP14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 KLHL26Q53HC5 615 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 B3GNTL1Q67FW5 361 aaPredicted RBP14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 GSG1LQ6UXU4 331 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 DNM1P46Q6ZS02 220 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 ZSCAN1Q8NBB4 408 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 ALOX5APP20292 161 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 FAM74A1Q5RGS3 127 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 ZNF660Q6AZW8 331 aaPredicted RBP14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 TSSK4Q6SA08 328 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 CFAP77Q6ZQR2 320 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 MDGA2Q7Z553 956 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 OR1S1Q8NH92 325 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 TAAR8Q969N4 342 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 FSCN3Q9NQT6 498 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 RABL2AQ9UBK7 228 aaPredicted RBP14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 RABL2BQ9UNT1 228 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 M0QYG6 137 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 SCDO00767 359 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 B3GALNT1O75752 331 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 ASAH2BP0C7U1 165 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 FOLR1P15328 257 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 C4BPBP20851 252 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 FASLGP48023 281 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 SLC25A1P53007 311 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 HNRNPKP61978 463 aaKnown RBP eCLIP14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 HLA-DQA1Q5Y7H0 255 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 ANKRD16Q6P6B7 361 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 ATRAIDQ6UW56 229 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 TMED4Q7Z7H5 227 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 EXO5Q9H790 373 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 MKL2Q9ULH7 1088 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms