RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 HIST1H2ABP04908 130 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 OMGP23515 440 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 SLC6A2P23975 617 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 STOMP27105 288 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 CDAP32320 146 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 PCGF2P35227 344 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 SEC61A1P61619 476 aaKnown RBP15.04■□□□□ -0
PDLIM4-202ENST00000379018 ZNF718Q3SXZ3 478 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 LEG1Q6P5S2 330 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 HIST3H2AQ7L7L0 130 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 NANOGNBQ7Z5D8 188 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 DPPA2Q7Z7J5 298 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 ZNF101Q8IZC7 436 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 CPEB3Q8NE35 698 aaKnown RBP15.04■□□□□ -0
PDLIM4-202ENST00000379018 AKR7LQ8NHP1 331 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 VANGL1Q8TAA9 524 aaPredicted RBP15.04■□□□□ -0
PDLIM4-202ENST00000379018 HIST1H2ACQ93077 130 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 SLC25A28Q96A46 364 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 MAELQ96JY0 434 aaKnown RBP15.04■□□□□ -0
PDLIM4-202ENST00000379018 KCNN2Q9H2S1 579 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 MSL2Q9HCI7 577 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 FAM53CQ9NYF3 392 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 EIF3KQ9UBQ5 218 aaKnown RBP15.04■□□□□ -0
PDLIM4-202ENST00000379018 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.04■□□□□ -0
PDLIM4-202ENST00000379018 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.04■□□□□ -0
PDLIM4-202ENST00000379018 RAB21Q9UL25 225 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 TRIM33Q9UPN9 1127 aa15.04■□□□□ -0
PDLIM4-202ENST00000379018 V9GYY5 206 aaPredicted RBP15.04■□□□□ -0
PDLIM4-202ENST00000379018 BLOC1S5-TXNDC5H3BN57 136 aa15.03■□□□□ -0
PDLIM4-202ENST00000379018 SNNO75324 88 aaPredicted RBP15.03■□□□□ -0
PDLIM4-202ENST00000379018 SERPINB7O75635 380 aa15.03■□□□□ -0
PDLIM4-202ENST00000379018 HOXB9P17482 250 aaPredicted RBP15.03■□□□□ -0
PDLIM4-202ENST00000379018 WNT5AP41221 380 aa15.03■□□□□ -0
PDLIM4-202ENST00000379018 WDR4P57081 412 aaKnown RBP15.03■□□□□ -0
PDLIM4-202ENST00000379018 STX1BP61266 288 aa15.03■□□□□ -0
PDLIM4-202ENST00000379018 IL13RA1P78552 427 aa15.03■□□□□ -0
PDLIM4-202ENST00000379018 ZNF154Q13106 437 aa15.03■□□□□ -0
PDLIM4-202ENST00000379018 KLF17Q5JT82 389 aaPredicted RBP15.03■□□□□ -0
PDLIM4-202ENST00000379018 SWT1Q5T5J6 900 aaKnown RBP15.03■□□□□ -0
PDLIM4-202ENST00000379018 TTC33Q6PID6 262 aaPredicted RBP15.03■□□□□ -0
PDLIM4-202ENST00000379018 NOXO1Q8NFA2 376 aa15.03■□□□□ -0
PDLIM4-202ENST00000379018 ABHD4Q8TB40 342 aa15.03■□□□□ -0
PDLIM4-202ENST00000379018 NSMAFQ92636 917 aa15.03■□□□□ -0
PDLIM4-202ENST00000379018 GPA33Q99795 319 aa15.03■□□□□ -0
PDLIM4-202ENST00000379018 MRI1Q9BV20 369 aa15.03■□□□□ -0
PDLIM4-202ENST00000379018 OR2J1Q9GZK6 312 aa15.03■□□□□ -0
PDLIM4-202ENST00000379018 MS4A7Q9GZW8 240 aaPredicted RBP15.03■□□□□ -0
PDLIM4-202ENST00000379018 IKZF5Q9H5V7 419 aa15.03■□□□□ -0
PDLIM4-202ENST00000379018 ZMAT3Q9HA38 289 aaKnown RBP15.03■□□□□ -0
PDLIM4-202ENST00000379018 PLEK2Q9NYT0 353 aa15.03■□□□□ -0
PDLIM4-202ENST00000379018 EGFL7Q9UHF1 273 aa15.03■□□□□ -0
PDLIM4-202ENST00000379018 ANGPT4Q9Y264 503 aa15.03■□□□□ -0
PDLIM4-202ENST00000379018 NPTNQ9Y639 398 aa15.03■□□□□ -0
PDLIM4-202ENST00000379018 SOX21Q9Y651 276 aaPredicted RBP15.03■□□□□ -0
PDLIM4-202ENST00000379018 TRAPPC2LH3BP13 241 aa15.02■□□□□ -0
PDLIM4-202ENST00000379018 CHP2O43745 196 aa15.02■□□□□ -0
PDLIM4-202ENST00000379018 SLC2A10O95528 541 aa15.02■□□□□ -0
PDLIM4-202ENST00000379018 IGHMP01871 453 aa15.02■□□□□ -0
PDLIM4-202ENST00000379018 F13BP05160 661 aa15.02■□□□□ -0
PDLIM4-202ENST00000379018 MMP7P09237 267 aaPredicted RBP15.02■□□□□ -0
PDLIM4-202ENST00000379018 ZNF32P17041 273 aa15.02■□□□□ -0
PDLIM4-202ENST00000379018 MDKP21741 143 aaPredicted RBP15.02■□□□□ -0
PDLIM4-202ENST00000379018 GDI2P50395 445 aaKnown RBP15.02■□□□□ -0
PDLIM4-202ENST00000379018 MMP15P51511 669 aa15.02■□□□□ -0
PDLIM4-202ENST00000379018 SGCAQ16586 387 aa15.02■□□□□ -0
PDLIM4-202ENST00000379018 ENTPD8Q5MY95 495 aa15.02■□□□□ -0
PDLIM4-202ENST00000379018 ZNF613Q6PF04 617 aa15.02■□□□□ -0
PDLIM4-202ENST00000379018 RFPL4BQ6ZWI9 263 aa15.02■□□□□ -0
PDLIM4-202ENST00000379018 MARS2Q96GW9 593 aaKnown RBP15.02■□□□□ -0
PDLIM4-202ENST00000379018 VAPAQ9P0L0 249 aa15.02■□□□□ -0
PDLIM4-202ENST00000379018 SLC7A7Q9UM01 511 aa15.02■□□□□ -0
PDLIM4-202ENST00000379018 A0A1W2PRG6 482 aa15.01□□□□□ -0.01
PDLIM4-202ENST00000379018 RNASE1P07998 156 aaKnown RBP15.01□□□□□ -0.01
PDLIM4-202ENST00000379018 ERVK-25P63136 954 aa15.01□□□□□ -0.01
PDLIM4-202ENST00000379018 TNFAIP6P98066 277 aaPredicted RBP15.01□□□□□ -0.01
PDLIM4-202ENST00000379018 SLC9A3R2Q15599 337 aa15.01□□□□□ -0.01
PDLIM4-202ENST00000379018 NPTX1Q15818 432 aa15.01□□□□□ -0.01
PDLIM4-202ENST00000379018 PAGE3Q5JUK9 113 aa15.01□□□□□ -0.01
PDLIM4-202ENST00000379018 SPATC1Q76KD6 591 aa15.01□□□□□ -0.01
PDLIM4-202ENST00000379018 RBM45Q8IUH3 476 aaKnown RBP15.01□□□□□ -0.01
PDLIM4-202ENST00000379018 BHLHE22Q8NFJ8 381 aaPredicted RBP15.01□□□□□ -0.01
PDLIM4-202ENST00000379018 OR6T1Q8NGN1 323 aa15.01□□□□□ -0.01
PDLIM4-202ENST00000379018 KLF14Q8TD94 323 aaPredicted RBP15.01□□□□□ -0.01
PDLIM4-202ENST00000379018 SLCO1B3Q9NPD5 702 aa15.01□□□□□ -0.01
PDLIM4-202ENST00000379018 TNFRSF19Q9NS68 423 aa15.01□□□□□ -0.01
PDLIM4-202ENST00000379018 TMEM120BA0PK00 339 aa15□□□□□ -0.01
PDLIM4-202ENST00000379018 TIMM8AO60220 97 aaPredicted RBP15□□□□□ -0.01
PDLIM4-202ENST00000379018 TRMUO75648 421 aaKnown RBP15□□□□□ -0.01
PDLIM4-202ENST00000379018 IGHV2-70P01814 119 aa15□□□□□ -0.01
PDLIM4-202ENST00000379018 THY1P04216 161 aa15□□□□□ -0.01
PDLIM4-202ENST00000379018 PPIBP23284 216 aaKnown RBP15□□□□□ -0.01
PDLIM4-202ENST00000379018 PPP1CBP62140 327 aa15□□□□□ -0.01
PDLIM4-202ENST00000379018 FMODQ06828 376 aa15□□□□□ -0.01
PDLIM4-202ENST00000379018 SRSF4Q08170 494 aaKnown RBP15□□□□□ -0.01
PDLIM4-202ENST00000379018 TAF11Q15544 211 aa15□□□□□ -0.01
PDLIM4-202ENST00000379018 LRIF1Q5T3J3 769 aa15□□□□□ -0.01
PDLIM4-202ENST00000379018 WDR93Q6P2C0 686 aa15□□□□□ -0.01
PDLIM4-202ENST00000379018 LINC00114Q6XXX2 140 aa15□□□□□ -0.01
PDLIM4-202ENST00000379018 KLHL36Q8N4N3 616 aa15□□□□□ -0.01
PDLIM4-202ENST00000379018 SPICQ8N5J4 248 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms