RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 DTWD1Q8N5C7 304 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 MANBALQ9NQG1 85 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 DNAJC15Q9Y5T4 150 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 PMP2P02689 132 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 HEXAP06865 529 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 DLX1P56177 255 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 RPS15AP62244 130 aaKnown RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 SP2Q02086 613 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 JOSD1Q15040 202 aaPredicted RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 Q499Y3 187 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 IL22RA1Q8N6P7 574 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 FAM71F1Q96KD3 344 aaPredicted RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 SDR39U1Q9NRG7 319 aaPredicted RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 ELF5Q9UKW6 265 aaPredicted RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 ZFP37Q9Y6Q3 630 aaPredicted RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 HIST1H1BP16401 226 aaKnown RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 GM2AP17900 193 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 ADIPOQQ15848 244 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 CATSPEREQ5SY80 951 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 FCRLBQ6BAA4 426 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 SDR9C7Q8NEX9 313 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 KCNJ15Q99712 375 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 DNMT3BQ9UBC3 853 aaKnown RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 ANKRD66B4E2M5 251 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 JMJD7P0C870 316 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 EPHA2P29317 976 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 CD200P41217 278 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 SOX10P56693 466 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 CTU2Q2VPK5 515 aaKnown RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 DCAF12L1Q5VU92 463 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 CDC20BQ86Y33 519 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 OR51A2Q8NGJ7 313 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 ESAMQ96AP7 390 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 ZNF558Q96NG5 402 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 TRAF4Q9BUZ4 470 aaPredicted RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 IKZF5Q9H5V7 419 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 PEF1Q9UBV8 284 aaKnown RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 POMT2Q9UKY4 750 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 PCDHGC4Q9Y5F7 938 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 CSNK1G3Q9Y6M4 447 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 TMEM136Q6ZRR5 245 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 PLPPR4Q7Z2D5 763 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 BCL2L2Q92843 193 aaPredicted RBP8.09□□□□□ -1.11
LIG3-202ENST00000378526 CITED2Q99967 270 aaPredicted RBP8.09□□□□□ -1.11
LIG3-202ENST00000378526 NSUN3Q9H649 340 aaKnown RBP8.09□□□□□ -1.11
LIG3-202ENST00000378526 DMRT3Q9NQL9 472 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 TAS2R5Q9NYW4 299 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 BTNL2Q9UIR0 455 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 SLC22A13Q9Y226 551 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 DOCK7Q96N67 2140 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 FAM183AA6NL82 134 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 NCR1O76036 304 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 OPRD1P41143 372 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 SLC16A12Q6ZSM3 486 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 OR2T10Q8NGZ9 312 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 OR8B4Q96RC9 309 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 GUSBP08236 651 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 UNGP13051 313 aaPredicted RBP8.09□□□□□ -1.11
LIG3-202ENST00000378526 ADAMTS17Q8TE56 1095 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 PIMREGQ9BSJ6 248 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 IL21Q9HBE4 155 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 RASL12Q9NYN1 266 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 SLC23A1Q9UHI7 598 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 PIKFYVEQ9Y2I7 2098 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 KIR2DS1A0A191URI9 304 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 SOCS6O14544 535 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 SOCS5O75159 536 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 USP2O75604 605 aaPredicted RBP8.09□□□□□ -1.11
LIG3-202ENST00000378526 FBLP22087 321 aaKnown RBP8.09□□□□□ -1.11
LIG3-202ENST00000378526 HTR1DP28221 377 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 PSMB10P40306 273 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 KIR2DS4P43632 304 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 MLF1P58340 268 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 KIR2DS1Q14954 304 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 RNF111Q6ZNA4 994 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 FAM24BQ8N5W8 94 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 ARRDC2Q8TBH0 407 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 MOGAT1Q96PD6 335 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 ZNF426Q9BUY5 554 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 ABHD16BQ9H3Z7 469 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 ZNF385DQ9H6B1 395 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 TRAPPC2LQ9UL33 140 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 GABRQQ9UN88 632 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 ABCC3O15438 1527 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 C4orf47A7E2U8 309 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 POP7O75817 140 aaKnown RBP8.09□□□□□ -1.11
LIG3-202ENST00000378526 PAPLNO95428 1278 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 OTX2P32243 289 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 PSRC1Q6PGN9 363 aaPredicted RBP8.09□□□□□ -1.11
LIG3-202ENST00000378526 OR14A16Q8NHC5 309 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 WFIKKN2Q8TEU8 576 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 RIMS4Q9H426 269 aaPredicted RBP8.09□□□□□ -1.11
LIG3-202ENST00000378526 TSPOAP1O95153 1857 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 C10orf71Q711Q0 1435 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 PLSCR5A0PG75 271 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 DBHP09172 617 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 SIRPAP78324 504 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 SLC35G1Q2M3R5 365 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 SERINC5Q86VE9 423 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms