RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 SYS1Q8N2H4 156 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 POMGNT2Q8NAT1 580 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 OR10H4Q8NGA5 316 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 PFN4Q8NHR9 129 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 PHYHIPQ92561 330 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 MRPL48Q96GC5 212 aaKnown RBP11.11□□□□□ -0.63
VRK3-202ENST00000377011 JSRP1Q96MG2 331 aaPredicted RBP11.11□□□□□ -0.63
VRK3-202ENST00000377011 CMTM3Q96MX0 182 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 GNRHR2Q96P88 292 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 FAM173AQ9BQD7 235 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 LMF2Q9BU23 707 aaKnown RBP11.11□□□□□ -0.63
VRK3-202ENST00000377011 ZDHHC11Q9H8X9 412 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 ADGRL4Q9HBW9 690 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 PLSCR2Q9NRY7 297 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 IL20RAQ9UHF4 553 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 NAV2Q8IVL1 2488 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 CENPVL1A0A0U1RR11 272 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 INMT-MINDY4F8WBC2 141 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 CDK2AP1O14519 115 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 TSPAN2O60636 221 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 PPM1BO75688 479 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 IGKV1D-16P01601 117 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 ARSBP15848 533 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 ADORA2A-AS1P86434 159 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 GALK2Q01415 458 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 GGTLC2Q14390 218 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 CCNJQ5T5M9 372 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 ZNF57Q68EA5 555 aaPredicted RBP11.1□□□□□ -0.63
VRK3-202ENST00000377011 DOLPP1Q86YN1 238 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 LSMEM1Q8N8F7 131 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 FAM98AQ8NCA5 519 aaKnown RBP11.1□□□□□ -0.63
VRK3-202ENST00000377011 C7orf57Q8NEG2 295 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 C17orf47Q8NEP4 570 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 ABHD4Q8TB40 342 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 AKAP1Q92667 903 aaKnown RBP eCLIP11.1□□□□□ -0.63
VRK3-202ENST00000377011 PTP4A1Q93096 173 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 UPRTQ96BW1 309 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 CCDC120Q96HB5 630 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 HYLS1Q96M11 299 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 C7orf50Q9BRJ6 194 aaKnown RBP11.1□□□□□ -0.63
VRK3-202ENST00000377011 SLC6A15Q9H2J7 730 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 ZNF703Q9H7S9 590 aaPredicted RBP11.1□□□□□ -0.63
VRK3-202ENST00000377011 PLSCR3Q9NRY6 295 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 ZNF275Q9NSD4 429 aaPredicted RBP11.1□□□□□ -0.63
VRK3-202ENST00000377011 C20orf141Q9NUB4 165 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 PTTG3PQ9NZH4 202 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 ABRACLQ9P1F3 81 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 SPRR3Q9UBC9 169 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 NLKQ9UBE8 527 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 MALT1Q9UDY8 824 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 KCNE5Q9UJ90 142 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 BOLA1Q9Y3E2 137 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 SIRT4Q9Y6E7 314 aaPredicted RBP11.1□□□□□ -0.63
VRK3-202ENST00000377011 TACC2O95359 2948 aa11.1□□□□□ -0.63
VRK3-202ENST00000377011 FRG2CA6NGY1 282 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 GNB5O14775 395 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 TO15178 435 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 SAGP10523 405 aaPredicted RBP11.09□□□□□ -0.63
VRK3-202ENST00000377011 CA7P43166 264 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 PSMD4P55036 377 aaKnown RBP11.09□□□□□ -0.63
VRK3-202ENST00000377011 ARPC4P59998 168 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 PITPNAQ00169 270 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 PLCXD2Q0VAA5 305 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 PLA1AQ53H76 456 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 THSD4Q6ZMP0 1018 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 ZNF550Q7Z398 422 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 ZAR1Q86SH2 424 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 NR2C2APQ86WQ0 139 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 CMIPQ8IY22 773 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 OR13C2Q8NGS9 318 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 OIT3Q8WWZ8 545 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 DEDD2Q8WXF8 326 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 ADOQ96SZ5 270 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 KLHDC3Q9BQ90 382 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 WACQ9BTA9 647 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 ZCCHC4Q9H5U6 513 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 FBXO34Q9NWN3 711 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 COPZ2Q9P299 210 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 CSMD2Q7Z408 3487 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 LRBAP50851 2863 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 A0A0G2JK05 382 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 A0A0G2JMP0 313 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 A0A0X1KG70 313 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 C7orf66A4D0T2 115 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 CCL21O00585 134 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 OGG1O15527 345 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 GATBO75879 557 aaKnown RBP11.09□□□□□ -0.63
VRK3-202ENST00000377011 ARL6IP5O75915 188 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 OR2T7P0C7T2 308 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 GKN3PP0CG01 181 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 RAG2P55895 527 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 RPS7P62081 194 aaKnown RBP11.09□□□□□ -0.63
VRK3-202ENST00000377011 ZNF85Q03923 595 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 INSL4Q14641 139 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 HYAL4Q2M3T9 481 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 KLHL12Q53G59 568 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 KRTCAP3Q53RY4 240 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 Q5BKY6 102 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 OR5M10Q6IEU7 315 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 ARL9Q6T311 187 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms