RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 SEZ6L2Q6UXD5 910 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 UNQ9370/PRO34162Q6UXP9 181 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 IZUMO1Q8IYV9 350 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 OR6V1Q8N148 313 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 DUSP19Q8WTR2 217 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 RNF166Q96A37 237 aaPredicted RBP12.62□□□□□ -0.39
MSH5-202ENST00000375740 SLC25A36Q96CQ1 311 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 OR6C1Q96RD1 312 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 TGIF2Q9GZN2 237 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 PIPOXQ9P0Z9 390 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 KLHDC2Q9Y2U9 406 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 PRELID3BQ9Y3B1 194 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 SESN1Q9Y6P5 492 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 PLSCR5A0PG75 271 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 TOX3O15405 576 aaPredicted RBP12.62□□□□□ -0.39
MSH5-202ENST00000375740 KDM4BO94953 1096 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 TIAF1O95411 115 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 SIX6O95475 246 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 FGF2P09038 288 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 P2RX1P51575 399 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 NANOS3P60323 173 aaKnown RBP12.62□□□□□ -0.39
MSH5-202ENST00000375740 CCL7P80098 99 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 HSD17B12Q53GQ0 312 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 RABEPKQ7Z6M1 372 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 RELTQ969Z4 430 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 SEC22CQ9BRL7 303 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 AUNIPQ9H7T9 357 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 ING1Q9UK53 422 aaPredicted RBP12.62□□□□□ -0.39
MSH5-202ENST00000375740 AK6Q9Y3D8 172 aaKnown RBP12.62□□□□□ -0.39
MSH5-202ENST00000375740 TMED7-TICAM2A0A0A6YYA0 188 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 C11orf98E9PRG8 122 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 L7N2F9 121 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 SLC25A12O75746 678 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 EPXP11678 715 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 ATF1P18846 271 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 EPHA8P29322 1005 aaPredicted RBP12.61□□□□□ -0.39
MSH5-202ENST00000375740 GPR85P60893 370 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 IGSF11Q5DX21 431 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 FAM198BQ6UWH4 519 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 BTN2A1Q7KYR7 527 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 Q7L0L9 218 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 GPR119Q8TDV5 335 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 ORAI1Q96D31 301 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 C12orf57Q99622 126 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 TMED7Q9Y3B3 224 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 A0A1W2PQM1 296 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 FLRT2O43155 660 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 SUSD5O60279 629 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 RPP14O95059 124 aaKnown RBP12.61□□□□□ -0.39
MSH5-202ENST00000375740 RENP00797 406 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 HEXBP07686 556 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 OR8G3PP0DMU2 310 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 MAGEB1P43366 347 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 VEGFCP49767 419 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 ACY1Q03154 408 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 SNTB2Q13425 540 aaKnown RBP12.61□□□□□ -0.39
MSH5-202ENST00000375740 NR0B2Q15466 257 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 OR5M10Q6IEU7 315 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 PYHIN1Q6K0P9 492 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 FGD2Q7Z6J4 655 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 ANKRD37Q7Z713 158 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 LINC00469Q8N7U9 141 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 CLRN3Q8NCR9 226 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 THAP3Q8WTV1 239 aaPredicted RBP12.61□□□□□ -0.39
MSH5-202ENST00000375740 PTDSS2Q9BVG9 487 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 C20orf85Q9H1P6 137 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 OR10A4Q9H209 315 aa12.61□□□□□ -0.39
MSH5-202ENST00000375740 KLF2Q9Y5W3 355 aaPredicted RBP12.61□□□□□ -0.39
MSH5-202ENST00000375740 A0A087WV48 116 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 LY6G6EA0A0G2JKS1 128 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 C2orf72A6NCS6 295 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 TRABD2BA6NFA1 517 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 PIN1P1O15428 100 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 GPRIN2O60269 458 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 SNRPBP14678 240 aaKnown RBP12.6□□□□□ -0.39
MSH5-202ENST00000375740 PNLIPP16233 465 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 POLR2HP52434 150 aaKnown RBP12.6□□□□□ -0.39
MSH5-202ENST00000375740 NKAIN1Q4KMZ8 207 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 NHLRC1Q6VVB1 395 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 OVCH1Q7RTY7 1134 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 MAMDC2Q7Z304 686 aaPredicted RBP12.6□□□□□ -0.39
MSH5-202ENST00000375740 OR11G2Q8NGC1 345 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 RPS4Y2Q8TD47 263 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 DUSP23Q9BVJ7 150 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 SYT4Q9H2B2 425 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 NOX4Q9NPH5 578 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 MRM2Q9UI43 246 aaKnown RBP12.6□□□□□ -0.39
MSH5-202ENST00000375740 COLQQ9Y215 455 aaPredicted RBP12.6□□□□□ -0.39
MSH5-202ENST00000375740 ZNF281Q9Y2X9 895 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 U3KQA8 63 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 IGLV3-12A0A075B6K2 115 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 TUBAL3A6NHL2 446 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 MCRIP1C9JLW8 97 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 ADAM10O14672 748 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 SIGLEC6O43699 453 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 ZNF354AO60765 605 aaPredicted RBP12.6□□□□□ -0.39
MSH5-202ENST00000375740 ZFPL1O95159 310 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 GPANK1O95872 356 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 PLGP00747 810 aaPredicted RBP12.6□□□□□ -0.39
MSH5-202ENST00000375740 TACSTD2P09758 323 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms