RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ABCE1P61221 599 aaKnown RBP8.12□□□□□ -1.11
UBR4-201ENST00000375218 ERVK11-1P61568 191 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 GTF2H2Q13888 395 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 DMRTC1Q5HYR2 192 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 GTF2H2CQ6P1K8 395 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 DCUN1D2Q6PH85 259 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 C12orf54Q6X4T0 127 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 TMPRSS12Q86WS5 348 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 WFDC8Q8IUA0 241 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 NPEPL1Q8NDH3 523 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 OR8U1Q8NH10 309 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 GATAD1Q8WUU5 269 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 CYGBQ8WWM9 190 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 COQ2Q96H96 371 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 PBX4Q9BYU1 374 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 ZNF556Q9HAH1 456 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 WFDC1Q9HC57 220 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 SLC6A20Q9NP91 592 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 SAMD4AQ9UPU9 718 aaKnown RBP8.12□□□□□ -1.11
UBR4-201ENST00000375218 MYO18AQ92614 2054 aaKnown RBP8.12□□□□□ -1.11
UBR4-201ENST00000375218 RDH16O75452 317 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 S1PR2O95136 353 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 PRNPP04156 253 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 JUNP05412 331 aaKnown RBP8.12□□□□□ -1.11
UBR4-201ENST00000375218 TBXA2RP21731 343 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 RPS19P39019 145 aaKnown RBP8.12□□□□□ -1.11
UBR4-201ENST00000375218 ZNF235Q14590 738 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 HENMT1Q5T8I9 393 aaKnown RBP8.12□□□□□ -1.11
UBR4-201ENST00000375218 TMEM205Q6UW68 189 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 CIR1Q86X95 450 aaPredicted RBP8.12□□□□□ -1.11
UBR4-201ENST00000375218 OR5J2Q8NH18 312 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 MYLIPQ8WY64 445 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 BPIFA2Q96DR5 249 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 TBL1XR1Q9BZK7 514 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 MFSD1Q9H3U5 465 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 Q9H521 79 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 PHPT1Q9NRX4 125 aaPredicted RBP8.12□□□□□ -1.11
UBR4-201ENST00000375218 CISHQ9NSE2 258 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 DCAF13Q9NV06 445 aaKnown RBP8.12□□□□□ -1.11
UBR4-201ENST00000375218 ABI3Q9P2A4 366 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 COLEC10Q9Y6Z7 277 aa8.12□□□□□ -1.11
UBR4-201ENST00000375218 COL4A2P08572 1712 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 DSCR3O14972 297 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 IDSP22304 550 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 S100A11P31949 105 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 IFNGR2P38484 337 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 TMPRSS3P57727 454 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 RPS15AP62244 130 aaKnown RBP8.11□□□□□ -1.11
UBR4-201ENST00000375218 CDK5R2Q13319 367 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 CLINT1Q14677 625 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 SPDYE7PQ495Y7 208 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 GPR33Q49SQ1 333 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 FAM219BQ5XKK7 198 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 NIPAL3Q6P499 406 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 FAM131AQ6UXB0 335 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 TMPPEQ6ZT21 453 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 IL17RELQ6ZVW7 336 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 MRPL53Q96EL3 112 aaKnown RBP8.11□□□□□ -1.11
UBR4-201ENST00000375218 CADM1Q9BY67 442 aaKnown RBP8.11□□□□□ -1.11
UBR4-201ENST00000375218 GCM1Q9NP62 436 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 ZFP64Q9NPA5 681 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 VPS13CQ709C8 3753 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 LRRK1Q38SD2 2015 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 LOC105369274A0A096LPK9 316 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 LOC102723532A0A0G2JNH3 316 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 H3BMH7 237 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 SYNGR3O43761 229 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 SOX30O94993 753 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 PCSK6P29122 969 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 WASP42768 502 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 HLCSP50747 726 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 POLR2LP62875 67 aaKnown RBP8.11□□□□□ -1.11
UBR4-201ENST00000375218 TRAF3Q13114 568 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 POM121L1PQ3SYA9 428 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 OR2G6Q5TZ20 316 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 FAM159AQ6UWV7 190 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 OR4N4Q8N0Y3 316 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 OR5B3Q8NH48 314 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 DEFB118Q96PH6 123 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 LAT2Q9GZY6 243 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 Q9N2J8 555 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 EQTNQ9NQ60 294 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 SMOXQ9NWM0 555 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 SIDT1Q9NXL6 827 aaKnown RBP8.11□□□□□ -1.11
UBR4-201ENST00000375218 EPHA6Q9UF33 1036 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 ICAM5Q9UMF0 924 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 PPIAL4EA0A075B759 164 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 TMEM129A0AVI4 362 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 B4DGG1 531 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 J3QLI3 93 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 K7ERI5 159 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 GPR31O00270 319 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 MT-ND4P03905 459 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 H2AFB1P0C5Y9 115 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 PPIAL4FP0DN26 164 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 GDNFP39905 211 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 PBX2P40425 430 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 KLF3P57682 345 aaPredicted RBP8.11□□□□□ -1.11
UBR4-201ENST00000375218 C2orf80Q0P641 193 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 SLC10A2Q12908 348 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms