RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 RIT1Q92963 219 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 TMEM203Q969S6 136 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 SLC25A28Q96A46 364 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 DIRAS2Q96HU8 199 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 RADILQ96JH8 1075 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 ATF6BQ99941 703 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 PIMREGQ9BSJ6 248 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 LRRC61Q9BV99 259 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 IFT27Q9BW83 186 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 GPR174Q9BXC1 333 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 SLC19A3Q9BZV2 496 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 SLC22A4Q9H015 551 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 ADGRL4Q9HBW9 690 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 MEPEQ9NQ76 525 aaPredicted RBP4.31□□□□□ -1.72
USP48-202ENST00000374730 PRTFDC1Q9NRG1 225 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 BABAM2Q9NXR7 383 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 FLRT3Q9NZU0 649 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 MUTYHQ9UIF7 546 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 KLHL21Q9UJP4 597 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 ICAM5Q9UMF0 924 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 UBE2J1Q9Y385 318 aaPredicted RBP4.31□□□□□ -1.72
USP48-202ENST00000374730 CLDN16Q9Y5I7 305 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 FER1L5A0AVI2 2057 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 A0A0A6YYC8 382 aaPredicted RBP4.3□□□□□ -1.72
USP48-202ENST00000374730 A0A1W2PR77 199 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 DAPL1A0PJW8 107 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 FAM90A18PA6NE21 464 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 FAM90A16PA6NEW6 464 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 TLCD2A6NGC4 264 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 SERINC4A6NH21 518 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 SLC9B1P1A6NJY1 282 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 FAM183AA6NL82 134 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 FAM90A9PA6NNJ1 464 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 FAM90A5PA8MXJ8 464 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 H0YIG0 161 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 I3L1I5 382 aaPredicted RBP4.3□□□□□ -1.72
USP48-202ENST00000374730 CLDN4O14493 209 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 LRRTM2O43300 516 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 DNPH1O43598 174 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 PLPP2O43688 288 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 SSX4O60224 188 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 SLC19A2O60779 497 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 ZNF217O75362 1048 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 TRIM3O75382 744 aaPredicted RBP4.3□□□□□ -1.72
USP48-202ENST00000374730 SC5DO75845 299 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 NDUFB8O95169 186 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 NDUFB2O95178 105 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 PPP1R3DO95685 299 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 IGKV1D-16P01601 117 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 CLPSP04118 112 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 CSF2P04141 144 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 PROS1P07225 676 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 FAM90A15PP0C7V4 464 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 FAM90A14PP0C7W9 464 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 CT45A8P0DMV1 189 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 CT45A9P0DMV2 189 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 CHRNB1P11230 501 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 IL9P15248 144 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 FUT1P19526 365 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 F8A1P23610 371 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 ABCD3P28288 659 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 ARL3P36405 182 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 DDOSTP39656 456 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 EVX1P49640 407 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 ATP12AP54707 1039 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 MAZP56270 477 aaKnown RBP4.3□□□□□ -1.72
USP48-202ENST00000374730 HSD17B7P56937 341 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 OR2B6P58173 313 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 RPS4XP62701 263 aaKnown RBP4.3□□□□□ -1.72
USP48-202ENST00000374730 ACTA2P62736 377 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 ACTG2P63267 376 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 ZNF85Q03923 595 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 CRYZQ08257 329 aaKnown RBP4.3□□□□□ -1.72
USP48-202ENST00000374730 STX4Q12846 297 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 SERTAD2Q14140 314 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 CRMP1Q14194 572 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 BCL2A1Q16548 175 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 DEFB110Q30KQ9 67 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 CT45A2Q5DJT8 189 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 ZNF542PQ5EBM4 170 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 ALG10BQ5I7T1 473 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 TCTE1Q5JU00 501 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 HBMQ6B0K9 141 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 CNIH2Q6PI25 160 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 PAMR1Q6UXH9 720 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 TMEM91Q6ZNR0 172 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 Q6ZS52 159 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 NCCRP1Q6ZVX7 275 aaPredicted RBP4.3□□□□□ -1.72
USP48-202ENST00000374730 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.3□□□□□ -1.72
USP48-202ENST00000374730 OAFQ86UD1 273 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 TPRA1Q86W33 373 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 GKN2Q86XP6 184 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 SYS1Q8N2H4 156 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 ARL14Q8N4G2 192 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 TMEM99Q8N816 258 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 ZNF615Q8N8J6 731 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 ZFP41Q8N8Y5 198 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 SCAIQ8N9R8 606 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 POMGNT2Q8NAT1 580 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 C7orf57Q8NEG2 295 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms