RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 WDR4P57081 412 aaKnown RBP12.95□□□□□ -0.34
SSR4-204ENST00000370087 RELBQ01201 579 aa12.95□□□□□ -0.34
SSR4-204ENST00000370087 SLC36A2Q495M3 483 aa12.95□□□□□ -0.34
SSR4-204ENST00000370087 PDCD4Q53EL6 469 aaKnown RBP12.95□□□□□ -0.34
SSR4-204ENST00000370087 PABPC1L2AQ5JQF8 200 aa12.95□□□□□ -0.34
SSR4-204ENST00000370087 C1QL4Q86Z23 238 aa12.95□□□□□ -0.34
SSR4-204ENST00000370087 PARP8Q8N3A8 854 aa12.95□□□□□ -0.34
SSR4-204ENST00000370087 SLC25A40Q8TBP6 338 aa12.95□□□□□ -0.34
SSR4-204ENST00000370087 ZNF566Q969W8 418 aa12.95□□□□□ -0.34
SSR4-204ENST00000370087 SLC25A44Q96H78 314 aaPredicted RBP12.95□□□□□ -0.34
SSR4-204ENST00000370087 ZNF347Q96SE7 839 aa12.95□□□□□ -0.34
SSR4-204ENST00000370087 TMEM43Q9BTV4 400 aa12.95□□□□□ -0.34
SSR4-204ENST00000370087 OR2J1Q9GZK6 312 aa12.95□□□□□ -0.34
SSR4-204ENST00000370087 MS4A7Q9GZW8 240 aaPredicted RBP12.95□□□□□ -0.34
SSR4-204ENST00000370087 PATZ1Q9HBE1 687 aaKnown RBP12.95□□□□□ -0.34
SSR4-204ENST00000370087 MSL2Q9HCI7 577 aa12.95□□□□□ -0.34
SSR4-204ENST00000370087 MED4Q9NPJ6 270 aa12.95□□□□□ -0.34
SSR4-204ENST00000370087 THAP1Q9NVV9 213 aa12.95□□□□□ -0.34
SSR4-204ENST00000370087 THUMPD1Q9NXG2 353 aaKnown RBP12.95□□□□□ -0.34
SSR4-204ENST00000370087 TRIM33Q9UPN9 1127 aa12.95□□□□□ -0.34
SSR4-204ENST00000370087 LOC100509620A0A075B734 347 aa12.94□□□□□ -0.34
SSR4-204ENST00000370087 IQCMA0A1B0GVH7 501 aa12.94□□□□□ -0.34
SSR4-204ENST00000370087 A8MXK9 166 aa12.94□□□□□ -0.34
SSR4-204ENST00000370087 SLC22A3O75751 556 aa12.94□□□□□ -0.34
SSR4-204ENST00000370087 FARS2O95363 451 aaKnown RBP12.94□□□□□ -0.34
SSR4-204ENST00000370087 ETS2P15036 469 aa12.94□□□□□ -0.34
SSR4-204ENST00000370087 CD80P33681 288 aa12.94□□□□□ -0.34
SSR4-204ENST00000370087 RGS8P57771 180 aaPredicted RBP12.94□□□□□ -0.34
SSR4-204ENST00000370087 NCALDP61601 193 aa12.94□□□□□ -0.34
SSR4-204ENST00000370087 BST1Q10588 318 aa12.94□□□□□ -0.34
SSR4-204ENST00000370087 C6orf10Q5SRN2 563 aa12.94□□□□□ -0.34
SSR4-204ENST00000370087 SLC2A7Q6PXP3 512 aa12.94□□□□□ -0.34
SSR4-204ENST00000370087 C9orf139Q6ZV77 190 aa12.94□□□□□ -0.34
SSR4-204ENST00000370087 MSRB3Q8IXL7 192 aa12.94□□□□□ -0.34
SSR4-204ENST00000370087 OR1J2Q8NGS2 313 aa12.94□□□□□ -0.34
SSR4-204ENST00000370087 KLF14Q8TD94 323 aaPredicted RBP12.94□□□□□ -0.34
SSR4-204ENST00000370087 LRRC8CQ8TDW0 803 aa12.94□□□□□ -0.34
SSR4-204ENST00000370087 MCHR2Q969V1 340 aa12.94□□□□□ -0.34
SSR4-204ENST00000370087 ITCHQ96J02 903 aa12.94□□□□□ -0.34
SSR4-204ENST00000370087 CITED1Q99966 193 aa12.94□□□□□ -0.34
SSR4-204ENST00000370087 MRI1Q9BV20 369 aa12.94□□□□□ -0.34
SSR4-204ENST00000370087 INTS9Q9NV88 658 aaKnown RBP12.94□□□□□ -0.34
SSR4-204ENST00000370087 FAM181BA6NEQ2 426 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 C5orf58C9J3I9 102 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 CLIC1O00299 241 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 HOXA3O43365 443 aaPredicted RBP12.93□□□□□ -0.34
SSR4-204ENST00000370087 MGRN1O60291 552 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 LYPD3O95274 346 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 PLATP00750 562 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 KNG1P01042 644 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 THY1P04216 161 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 CD55P08174 381 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 ADH4P08319 380 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 APLNRP35414 380 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 PAX2Q02962 417 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 PAX8Q06710 450 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 SLC3A1Q07837 685 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 ZMYND11Q15326 602 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 ZNF74Q16587 644 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 MOGQ16653 247 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 HIST3H3Q16695 136 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 ZNF718Q3SXZ3 478 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 MBNL2Q5VZF2 373 aaKnown RBP12.93□□□□□ -0.34
SSR4-204ENST00000370087 C16orf87Q6PH81 154 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 LINC00114Q6XXX2 140 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 AKR7LQ8NHP1 331 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 GTF2H4Q92759 462 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 POM121L2Q96KW2 1035 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 SIGLEC11Q96RL6 698 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 EGLN1Q9GZT9 426 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 TMEM27Q9HBJ8 222 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 TNFRSF19Q9NS68 423 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 TMEM106BQ9NUM4 274 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 ZNF446Q9NWS9 450 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 SLC25A37Q9NYZ2 338 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 SELENONQ9NZV5 590 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 KLHL21Q9UJP4 597 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 RYR3Q15413 4870 aa12.93□□□□□ -0.34
SSR4-204ENST00000370087 TRAV40A0A0B4J280 105 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 PLSCR5A0PG75 271 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 M0R3H8 397 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 DYNC1I1O14576 645 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 RNF13O43567 381 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 CH25HO95992 272 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 MT-ATP6P00846 226 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 NGFP01138 241 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 PTHP01270 115 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 STOMP27105 288 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 CDAP32320 146 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 RAG2P55895 527 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 HSF2Q03933 536 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 PLP2Q04941 152 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 FADDQ13158 208 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 NPTX1Q15818 432 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 MSANTD1Q6ZTZ1 278 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 DPPA2Q7Z7J5 298 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 TSPYL5Q86VY4 417 aaPredicted RBP12.92□□□□□ -0.34
SSR4-204ENST00000370087 SPICQ8N5J4 248 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 OR52E2Q8NGJ4 325 aa12.92□□□□□ -0.34
SSR4-204ENST00000370087 NABP1Q96AH0 204 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms