RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 IGHV3-15A0A0B4J1V0 119 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 A0A0B4J2A0 478 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 POM121BA6NF01 834 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 FRG2CA6NGY1 282 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 ACHEP22303 614 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 CDONQ4KMG0 1287 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 PLPP7Q8NBV4 271 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 NT5CQ8TCD5 201 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 LIPHQ8WWY8 451 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 LINC01599Q8WXQ3 324 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 OR52A5Q9H2C5 316 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 GFOD1Q9NXC2 390 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 SHPKQ9UHJ6 478 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 IGLV3-25P01717 112 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 QDPRP09417 244 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 GPR85P60893 370 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF628Q5EBL2 1059 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF546Q86UE3 836 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 OR7G2Q8NG99 324 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 OR52N1Q8NH53 320 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 FAM3DQ96BQ1 224 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 C8orf44Q96CB5 159 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 LYSMD1Q96S90 227 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 NTNG1Q9Y2I2 539 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 HRH3Q9Y5N1 445 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 A0A1W2PPC4 97 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF891A8MT65 544 aaPredicted RBP7.98□□□□□ -1.13
PTCD3-201ENST00000254630 E9PI62 339 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 M0QYG6 137 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 DLX5P56178 289 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 TAS2R30P59541 319 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 FXNQ16595 210 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 VWA2Q5GFL6 755 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 THEM4Q5T1C6 240 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 OLIG1Q8TAK6 271 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 SMAP2Q8WU79 429 aaPredicted RBP7.98□□□□□ -1.13
PTCD3-201ENST00000254630 DVL3Q92997 716 aaPredicted RBP7.98□□□□□ -1.13
PTCD3-201ENST00000254630 TMEM106AQ96A25 262 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 DUSP22Q9NRW4 184 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 MUTYHQ9UIF7 546 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 PRELID3BQ9Y3B1 194 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 TIMM10BQ9Y5J6 103 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 FOCADQ5VW36 1801 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 C7orf72A4D263 438 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 M0R082 166 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 FGF17O60258 216 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 HBG1P69891 147 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 HBG2P69892 147 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 TLE4Q04727 773 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 DUSP8Q13202 625 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 GALEQ14376 348 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 OR10J5Q8NHC4 309 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 CCL4L1Q8NHW4 92 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 LIN37Q96GY3 246 aaPredicted RBP7.97□□□□□ -1.13
PTCD3-201ENST00000254630 MBOAT4Q96T53 435 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 TEX101Q9BY14 249 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF346Q9UL40 294 aaKnown RBP7.97□□□□□ -1.13
PTCD3-201ENST00000254630 MYH14Q7Z406 1995 aaKnown RBP7.97□□□□□ -1.13
PTCD3-201ENST00000254630 ZDHHC11BP0C7U3 371 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 CCR2P41597 374 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 BTG2P78543 158 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 AARDQ4LEZ3 155 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 KDM4DQ6B0I6 523 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 FJX1Q86VR8 437 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 BATF2Q8N1L9 274 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 MYEOVQ96EZ4 313 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 REEP6Q96HR9 211 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 TAAR9Q96RI9 348 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 GABARAPL1Q9H0R8 117 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 PRELID1Q9Y255 219 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 HRO43593 1189 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 LCMT2O60294 686 aaKnown RBP7.97□□□□□ -1.13
PTCD3-201ENST00000254630 ZGLP1P0C6A0 271 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 FOLR1P15328 257 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 NDUFB7P17568 137 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 MMP11P24347 488 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 RAD52P43351 418 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 ACVR1Q04771 509 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 SELENBP1Q13228 472 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 TATDN3Q17R31 274 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF385BQ569K4 471 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 GLYATL3Q5SZD4 288 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 SLC22A25Q6T423 547 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 OVCH1Q7RTY7 1134 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 KMT5CQ86Y97 462 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 RBM45Q8IUH3 476 aaKnown RBP7.97□□□□□ -1.13
PTCD3-201ENST00000254630 C11orf40Q8WZ69 217 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 FGF14Q92915 247 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 TSLPQ969D9 159 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 S1PR5Q9H228 398 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 LTB4R2Q9NPC1 389 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 OSGIN1Q9UJX0 560 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 GPR55Q9Y2T6 319 aaPredicted RBP7.97□□□□□ -1.13
PTCD3-201ENST00000254630 SULT1B1O43704 296 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 GSTP1P09211 210 aaKnown RBP7.97□□□□□ -1.13
PTCD3-201ENST00000254630 IGFBP6P24592 240 aaPredicted RBP7.97□□□□□ -1.13
PTCD3-201ENST00000254630 SLC6A12P48065 614 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 TGM4P49221 684 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 FOXC1Q12948 553 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 EBPQ15125 230 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms