RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 SPSB2Q99619 263 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 PBX4Q9BYU1 374 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 SLC52A3Q9NQ40 469 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 TRAV27A0A087WT01 109 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 TBC1D3EA0A087X179 549 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 NSA2O95478 260 aaKnown RBP11.83□□□□□ -0.52
VAMP4-201ENST00000236192 CDK5R1Q15078 307 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 CYHR1Q6ZMK1 362 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 SLC16A14Q7RTX9 510 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 POC1BQ8TC44 478 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 RERGQ96A58 199 aaPredicted RBP11.83□□□□□ -0.52
VAMP4-201ENST00000236192 NDUFAF3Q9BU61 184 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 GAL3ST2Q9H3Q3 398 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 H0YIV9 168 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 DVL2O14641 736 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 CIDEAO60543 219 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 POP4O95707 220 aaKnown RBP11.83□□□□□ -0.52
VAMP4-201ENST00000236192 SLC8B1Q6J4K2 584 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 MAMSTRQ6ZN01 415 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 SPNS2Q8IVW8 549 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 PRSS58Q8IYP2 241 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 SYS1Q8N2H4 156 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 OR4D6Q8NGJ1 314 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 TMEM121BQ9BXQ6 578 aaPredicted RBP11.83□□□□□ -0.52
VAMP4-201ENST00000236192 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.83□□□□□ -0.52
VAMP4-201ENST00000236192 CCDC187A0A096LP49 1063 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 MRPS34P82930 218 aaKnown RBP11.82□□□□□ -0.52
VAMP4-201ENST00000236192 NECAP1Q8NC96 275 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 OR13C8Q8NGS7 320 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 OR51I2Q9H344 312 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 IL17CQ9P0M4 197 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 OR2A4O95047 310 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 MPGP29372 298 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 ADCYAP1R1P41586 468 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 ADPRHP54922 357 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 LIM2P55344 173 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 ZP1P60852 638 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 SMAD3P84022 425 aaKnown RBP11.82□□□□□ -0.52
VAMP4-201ENST00000236192 MARCH8Q5T0T0 291 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 TMPRSS7Q7RTY8 843 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 ADGRE4PQ86SQ3 457 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 OR11G2Q8NGC1 345 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 MITD1Q8WV92 249 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 DNAJA3Q96EY1 480 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 C14orf144Q96I85 54 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 OR2A7Q96R45 310 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 F2RL3Q96RI0 385 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 PARD6GQ9BYG4 376 aaPredicted RBP11.82□□□□□ -0.52
VAMP4-201ENST00000236192 ELP3Q9H9T3 547 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 NPTNQ9Y639 398 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 PMS2P1A4D2B8 440 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 ANKRD34CP0C6C1 535 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 ATP6V1FQ16864 119 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 C19orf48Q6RUI8 117 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 FBXW12Q6X9E4 464 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 WDR88Q6ZMY6 472 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.82□□□□□ -0.52
VAMP4-201ENST00000236192 VRK2Q86Y07 508 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 ZNF552Q9H707 407 aaPredicted RBP11.82□□□□□ -0.52
VAMP4-201ENST00000236192 CERS4Q9HA82 394 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 SCN11AQ9UI33 1791 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 C1orf226A1L170 272 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 ZFP92A6NM28 416 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 MAN2B1O00754 1011 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 DVL1O14640 695 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 OR5AC1P0C628 307 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 PRPH2P23942 346 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 STARD6P59095 220 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 PRPS1P60891 318 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 GRINAQ7Z429 371 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 SLC43A2Q8N370 569 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 FAM3CQ92520 227 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 NPDC1Q9NQX5 325 aaPredicted RBP11.82□□□□□ -0.52
VAMP4-201ENST00000236192 DNAJB11Q9UBS4 358 aa11.82□□□□□ -0.52
VAMP4-201ENST00000236192 ZC3H12DA2A288 527 aaKnown RBP11.81□□□□□ -0.52
VAMP4-201ENST00000236192 FAM171A2A8MVW0 826 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 B3GALT2O43825 422 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 PDGFBP01127 241 aaPredicted RBP11.81□□□□□ -0.52
VAMP4-201ENST00000236192 CMPK1P30085 196 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 SLC25A30Q5SVS4 291 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 SIRT6Q8N6T7 355 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 SENP5Q96HI0 755 aaPredicted RBP11.81□□□□□ -0.52
VAMP4-201ENST00000236192 EHFQ9NZC4 300 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 SLC2A10O95528 541 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 IGHV2-70P01814 119 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 RNH1P13489 461 aaKnown RBP11.81□□□□□ -0.52
VAMP4-201ENST00000236192 CRMP1Q14194 572 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 DPY19L4Q7Z388 723 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 NEIL2Q969S2 332 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 CXorf36Q9H7Y0 433 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 SIDT1Q9NXL6 827 aaKnown RBP11.81□□□□□ -0.52
VAMP4-201ENST00000236192 NCDNQ9UBB6 729 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 CACNG4Q9UBN1 327 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 PRSS21Q9Y6M0 314 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 A0A087WUU8 490 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 ANTXRLA6NF34 631 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 B4DEV8 164 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 TRAF3IP2O43734 574 aaPredicted RBP11.81□□□□□ -0.52
VAMP4-201ENST00000236192 GREM1O60565 184 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 OPN1MWP04001 364 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms