RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 PPP1R1CQ8WVI7 109 aa12.88□□□□□ -0.35
PCDHB3-201ENST00000231130 SMARCD2Q92925 531 aa12.88□□□□□ -0.35
PCDHB3-201ENST00000231130 POM121Q96HA1 1249 aa12.88□□□□□ -0.35
PCDHB3-201ENST00000231130 POFUT1Q9H488 388 aa12.88□□□□□ -0.35
PCDHB3-201ENST00000231130 ZNF337Q9Y3M9 751 aa12.88□□□□□ -0.35
PCDHB3-201ENST00000231130 INSL6Q9Y581 213 aa12.88□□□□□ -0.35
PCDHB3-201ENST00000231130 OTOL1A6NHN0 477 aaPredicted RBP12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 ARG1P05089 322 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 DBIP07108 87 aaKnown RBP12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 ADRA2CP18825 462 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 SLC2A5P22732 501 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 PCP4P48539 62 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 DUSP8Q13202 625 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 ARHGAP11AQ6P4F7 1023 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 LCN9Q8WX39 176 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 TMEM106AQ96A25 262 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 AKR1E2Q96JD6 320 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 FAM117AQ9C073 453 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 PARP12Q9H0J9 701 aaKnown RBP12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 TRAV8-7A0A075B6U6 113 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 TRAV14DV4A0A0A6YYC5 116 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 SLC31A1O15431 190 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 ADH1AP07327 375 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 SFTA3P0C7M3 94 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 ATP1B3P54709 279 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 ARHGAP11BQ3KRB8 267 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 LIPNQ5VXI9 398 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 RGP1Q92546 391 aaPredicted RBP12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 MRPL38Q96DV4 380 aaKnown RBP12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 C14orf144Q96I85 54 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 NOTCH4Q99466 2003 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 KIAA0100Q14667 2235 aaKnown RBP12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 F13BP05160 661 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 CD53P19397 219 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 VAMP1P23763 118 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 MNDAP41218 407 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 GAS6Q14393 721 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 CSRP2Q16527 193 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 PRAMEF8Q5VWM4 474 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 PRAMEF7Q5VXH5 474 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 FAM219AQ8IW50 185 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 OR5AK2Q8NH90 309 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 SULT4A1Q9BR01 284 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 SELENOIQ9C0D9 397 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 RHOFQ9HBH0 211 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 ACKR4Q9NPB9 350 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 DEC1Q9P2X7 70 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 WASF3Q9UPY6 502 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 LRRK1Q38SD2 2015 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 PLXNA2O75051 1894 aa12.87□□□□□ -0.35
PCDHB3-201ENST00000231130 ST6GAL1P15907 406 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 CD34P28906 385 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 CMPK1P30085 196 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 TLX1P31314 330 aaPredicted RBP12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 RBM34P42696 430 aaKnown RBP12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 RPS10P46783 165 aaKnown RBP12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 ILF3Q12906 894 aaKnown RBP eCLIP12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 RUNX2Q13950 521 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 ELAVL3Q14576 367 aaKnown RBP12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 HNRNPA1L2Q32P51 320 aaKnown RBP12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 PAPD4Q6PIY7 484 aaKnown RBP12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 TMPRSS11FQ6ZWK6 438 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 RHOUQ7L0Q8 258 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 FAM220AQ7Z4H9 259 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 KCNRGQ8N5I3 272 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 AVL9Q8NBF6 648 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 OR10D4PQ8NGN7 298 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 TSEN15Q8WW01 171 aaKnown RBP12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 HAVCR1Q96D42 359 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 LMAN2LQ9H0V9 348 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 PCDHGA1Q9Y5H4 931 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 ELOA3DA6NLF2 546 aaPredicted RBP12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 AP4M1O00189 453 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 CTDSPLO15194 276 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 SLC31A2O15432 143 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 CTNSO60931 367 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 OR8U8P0C7N1 319 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 MAPK3P27361 379 aaPredicted RBP12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 ELOA3BQ3SY89 546 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 EXOSC6Q5RKV6 272 aaKnown RBP12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 RNF113BQ8IZP6 322 aaKnown RBP12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 ELOA3Q8NG57 546 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 OR6N2Q8NGY6 317 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 ATG5Q9H1Y0 275 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 POLE3Q9NRF9 147 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 PPP4R1LQ9P1A2 415 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 NDUFB2O95178 105 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 HLA-DQA2P01906 255 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 PVRP15151 417 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 KIAA0141Q14154 515 aaPredicted RBP12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 ZIC1Q15915 447 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 ENPP7Q6UWV6 458 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 ACOT7LQ6ZUV0 252 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 CD163Q86VB7 1156 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 TGIF2LXQ8IUE1 241 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 DND1Q8IYX4 353 aaKnown RBP12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 ZNF615Q8N8J6 731 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 TEX19Q8NA77 164 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 PPP1R14AQ96A00 147 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 SEC11CQ9BY50 192 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms