RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ALOX12BO75342 701 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 POP7O75817 140 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 OR2B3O76000 313 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 ECDO95905 644 aaPredicted RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 GOT2P00505 430 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 HPP00738 406 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 APOC2P02655 101 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 HBQ1P09105 142 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 SLC35G4P0C7Q5 338 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 PRG2P13727 222 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 ATP1B2P14415 290 aaPredicted RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 MAGP20916 626 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 DRD5P21918 477 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 UGT1A4P22310 534 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 OTX2P32243 289 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 FOXN2P32314 431 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 SHMT2P34897 504 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 ID1P41134 155 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 PTGFRP43088 359 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 CA7P43166 264 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 SLC1A6P48664 564 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 MARCKSL1P49006 195 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 HNMTP50135 292 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 RPS27AP62979 156 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 SNTB2Q13425 540 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 KIAA0141Q14154 515 aaPredicted RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 FASTKQ14296 549 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 TAF1AQ15573 450 aaPredicted RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 ZKSCAN8Q15776 578 aaPredicted RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 HADHQ16836 314 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 SLC5A12Q1EHB4 618 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF630Q2M218 657 aaPredicted RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 DEFB110Q30KQ9 67 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 TMEM30BQ3MIR4 351 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 SLC36A3Q495N2 470 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 NKAIN1Q4KMZ8 207 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 SPATA46Q5T0L3 261 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 H3F3CQ6NXT2 135 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 LEG1Q6P5S2 330 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 TMEM220Q6QAJ8 160 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 ATRAIDQ6UW56 229 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 TMEM205Q6UW68 189 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 ERASQ7Z444 233 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 P4HA3Q7Z4N8 544 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 SNX20Q7Z614 316 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 NET1Q7Z628 596 aaPredicted RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 LHFPL4Q7Z7J7 247 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 CARM1Q86X55 608 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 GRAMD2AQ8IUY3 354 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 ZDHHC21Q8IVQ6 265 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 CCDC36Q8IYA8 594 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 KATNAL2Q8IYT4 538 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 SPAG16Q8N0X2 631 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 WDSUB1Q8N9V3 476 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 MAPK1IP1LQ8NDC0 245 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 MDS2Q8NDY4 140 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 NFAM1Q8NET5 270 aaPredicted RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 OR4K2Q8NGD2 314 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 OR5AR1Q8NGP9 310 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 OR1K1Q8NGR3 316 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 OR13C4Q8NGS5 318 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 OR4F5Q8NH21 305 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF519Q8TB69 540 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 SPPL2AQ8TCT8 520 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 LKAAEAR1Q8TD35 194 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 DLX4Q92988 240 aaPredicted RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 FBXO17Q96EF6 278 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 DNAJC1Q96KC8 554 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 C12orf66Q96MD2 445 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 VSTM2LQ96N03 204 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 ANKRD27Q96NW4 1050 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 VAT1Q99536 393 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 LITAFQ99732 161 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 NPAS2Q99743 824 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 TMEM121Q9BTD3 319 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 ILKAPQ9H0C8 392 aaPredicted RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 PARLQ9H300 379 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF696Q9H7X3 374 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 KAT8Q9H7Z6 458 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 Q9HAA7 133 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 UGT1A7Q9HAW7 530 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 UGT1A10Q9HAW8 530 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 UGT1A8Q9HAW9 530 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 FANCEQ9HB96 536 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 LPAR2Q9HBW0 351 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 MRM3Q9HC36 420 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 NRN1Q9NPD7 142 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 IMP3Q9NV31 184 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 NLE1Q9NVX2 485 aaPredicted RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 NDE1Q9NXR1 346 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 CHMP5Q9NZZ3 219 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 THYN1Q9P016 225 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 MBD2Q9UBB5 411 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 DHCR7Q9UBM7 475 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 CIDEBQ9UHD4 219 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 PURGQ9UJV8 347 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 NXT1Q9UKK6 140 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 IKZF3Q9UKT9 509 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 EMCNQ9ULC0 261 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms