RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 TESQ9UGI8 421 aaKnown RBP17.03■□□□□ 0.32
TARDBP-228ENST00000629725 A0A0B4J2E0 115 aa17.02■□□□□ 0.32
TARDBP-228ENST00000629725 A0A1B0GX12 115 aa17.02■□□□□ 0.32
TARDBP-228ENST00000629725 DHHO43323 396 aa17.02■□□□□ 0.32
TARDBP-228ENST00000629725 MT-ATP6P00846 226 aa17.02■□□□□ 0.32
TARDBP-228ENST00000629725 IGHMP01871 453 aa17.02■□□□□ 0.32
TARDBP-228ENST00000629725 EPHA3P29320 983 aa17.02■□□□□ 0.32
TARDBP-228ENST00000629725 GCH1P30793 250 aa17.02■□□□□ 0.32
TARDBP-228ENST00000629725 APLNRP35414 380 aa17.02■□□□□ 0.32
TARDBP-228ENST00000629725 MMP15P51511 669 aa17.02■□□□□ 0.32
TARDBP-228ENST00000629725 FADDQ13158 208 aa17.02■□□□□ 0.32
TARDBP-228ENST00000629725 OR1Q1Q15612 314 aa17.02■□□□□ 0.32
TARDBP-228ENST00000629725 C6orf10Q5SRN2 563 aa17.02■□□□□ 0.32
TARDBP-228ENST00000629725 RBM15BQ8NDT2 890 aaKnown RBP17.02■□□□□ 0.32
TARDBP-228ENST00000629725 SLC25A44Q96H78 314 aaPredicted RBP17.02■□□□□ 0.32
TARDBP-228ENST00000629725 TMEM43Q9BTV4 400 aa17.02■□□□□ 0.32
TARDBP-228ENST00000629725 MRI1Q9BV20 369 aa17.02■□□□□ 0.32
TARDBP-228ENST00000629725 MS4A7Q9GZW8 240 aaPredicted RBP17.02■□□□□ 0.32
TARDBP-228ENST00000629725 WDR55Q9H6Y2 383 aaPredicted RBP17.02■□□□□ 0.32
TARDBP-228ENST00000629725 TRAPPC2LH3BP13 241 aa17.01■□□□□ 0.31
TARDBP-228ENST00000629725 TM9SF1O15321 606 aa17.01■□□□□ 0.31
TARDBP-228ENST00000629725 QDPRP09417 244 aa17.01■□□□□ 0.31
TARDBP-228ENST00000629725 IDO1P14902 403 aa17.01■□□□□ 0.31
TARDBP-228ENST00000629725 BGNP21810 368 aa17.01■□□□□ 0.31
TARDBP-228ENST00000629725 CCNOP22674 350 aa17.01■□□□□ 0.31
TARDBP-228ENST00000629725 STX3Q13277 289 aa17.01■□□□□ 0.31
TARDBP-228ENST00000629725 ZNF718Q3SXZ3 478 aa17.01■□□□□ 0.31
TARDBP-228ENST00000629725 DHRS4L2Q6PKH6 230 aa17.01■□□□□ 0.31
TARDBP-228ENST00000629725 MSANTD1Q6ZTZ1 278 aa17.01■□□□□ 0.31
TARDBP-228ENST00000629725 TMIGD2Q96BF3 282 aa17.01■□□□□ 0.31
TARDBP-228ENST00000629725 SPATA5L1Q9BVQ7 753 aa17.01■□□□□ 0.31
TARDBP-228ENST00000629725 RAD21L1Q9H4I0 556 aa17.01■□□□□ 0.31
TARDBP-228ENST00000629725 ARMCX1Q9P291 453 aa17.01■□□□□ 0.31
TARDBP-228ENST00000629725 POLR3KQ9Y2Y1 108 aaPredicted RBP17.01■□□□□ 0.31
TARDBP-228ENST00000629725 INSIG2Q9Y5U4 225 aa17.01■□□□□ 0.31
TARDBP-228ENST00000629725 NPTNQ9Y639 398 aa17.01■□□□□ 0.31
TARDBP-228ENST00000629725 WNK1Q9H4A3 2382 aa17■□□□□ 0.31
TARDBP-228ENST00000629725 CLIC1O00299 241 aa17■□□□□ 0.31
TARDBP-228ENST00000629725 TPST1O60507 370 aa17■□□□□ 0.31
TARDBP-228ENST00000629725 BMP2P12643 396 aa17■□□□□ 0.31
TARDBP-228ENST00000629725 ZNF12P17014 697 aa17■□□□□ 0.31
TARDBP-228ENST00000629725 CDH12P55289 794 aa17■□□□□ 0.31
TARDBP-228ENST00000629725 RGS8P57771 180 aaPredicted RBP17■□□□□ 0.31
TARDBP-228ENST00000629725 MELKQ14680 651 aa17■□□□□ 0.31
TARDBP-228ENST00000629725 NRN1LQ496H8 165 aa17■□□□□ 0.31
TARDBP-228ENST00000629725 CEP85LQ5SZL2 805 aa17■□□□□ 0.31
TARDBP-228ENST00000629725 SPATA46Q5T0L3 261 aa17■□□□□ 0.31
TARDBP-228ENST00000629725 THEM4Q5T1C6 240 aa17■□□□□ 0.31
TARDBP-228ENST00000629725 LRRC18Q8N456 261 aa17■□□□□ 0.31
TARDBP-228ENST00000629725 KLHL36Q8N4N3 616 aa17■□□□□ 0.31
TARDBP-228ENST00000629725 IPCEF1Q8WWN9 437 aaPredicted RBP17■□□□□ 0.31
TARDBP-228ENST00000629725 TMEM109Q9BVC6 243 aa17■□□□□ 0.31
TARDBP-228ENST00000629725 NPHS2Q9NP85 383 aa17■□□□□ 0.31
TARDBP-228ENST00000629725 CYSLTR2Q9NS75 346 aa17■□□□□ 0.31
TARDBP-228ENST00000629725 EGFL7Q9UHF1 273 aa17■□□□□ 0.31
TARDBP-228ENST00000629725 RNF13O43567 381 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 IGHV2-70P01814 119 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 SBK2P0C263 348 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 PGA4P0DJD7 388 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 PGA3P0DJD8 388 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 OMGP23515 440 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 PCGF2P35227 344 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 LIPAP38571 399 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 MPV17P39210 176 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 MTNR1AP48039 350 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 HSF2Q03933 536 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 KRT71Q3SY84 523 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 TMEM255AQ5JRV8 349 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 SWT1Q5T5J6 900 aaKnown RBP16.99■□□□□ 0.31
TARDBP-228ENST00000629725 NXNQ6DKJ4 435 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 SPATC1Q76KD6 591 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 KRT73Q86Y46 540 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 SPICQ8N5J4 248 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 NFKBIDQ8NI38 313 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 GEMIN6Q8WXD5 167 aaKnown RBP16.99■□□□□ 0.31
TARDBP-228ENST00000629725 MARS2Q96GW9 593 aaKnown RBP16.99■□□□□ 0.31
TARDBP-228ENST00000629725 DCLRE1CQ96SD1 692 aaKnown RBP16.99■□□□□ 0.31
TARDBP-228ENST00000629725 TAS2R5Q9NYW4 299 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 MMP24Q9Y5R2 645 aa16.99■□□□□ 0.31
TARDBP-228ENST00000629725 ZSCAN5BA6NJL1 495 aa16.98■□□□□ 0.31
TARDBP-228ENST00000629725 TRPC5OSA6NMA1 111 aa16.98■□□□□ 0.31
TARDBP-228ENST00000629725 TPST2O60704 377 aa16.98■□□□□ 0.31
TARDBP-228ENST00000629725 ADH4P08319 380 aa16.98■□□□□ 0.31
TARDBP-228ENST00000629725 MMP7P09237 267 aaPredicted RBP16.98■□□□□ 0.31
TARDBP-228ENST00000629725 STOMP27105 288 aa16.98■□□□□ 0.31
TARDBP-228ENST00000629725 SLC6A9P48067 706 aa16.98■□□□□ 0.31
TARDBP-228ENST00000629725 BST1Q10588 318 aa16.98■□□□□ 0.31
TARDBP-228ENST00000629725 MBNL2Q5VZF2 373 aaKnown RBP16.98■□□□□ 0.31
TARDBP-228ENST00000629725 WDR93Q6P2C0 686 aa16.98■□□□□ 0.31
TARDBP-228ENST00000629725 C16orf87Q6PH81 154 aa16.98■□□□□ 0.31
TARDBP-228ENST00000629725 UNQ6126/PRO20091Q6UXV3 157 aa16.98■□□□□ 0.31
TARDBP-228ENST00000629725 RANBP3LQ86VV4 465 aaPredicted RBP16.98■□□□□ 0.31
TARDBP-228ENST00000629725 ZNF101Q8IZC7 436 aa16.98■□□□□ 0.31
TARDBP-228ENST00000629725 DIRC2Q96SL1 478 aa16.98■□□□□ 0.31
TARDBP-228ENST00000629725 PAIP1Q9H074 479 aaKnown RBP16.98■□□□□ 0.31
TARDBP-228ENST00000629725 PATZ1Q9HBE1 687 aaKnown RBP16.98■□□□□ 0.31
TARDBP-228ENST00000629725 ZIM2Q9NZV7 527 aa16.98■□□□□ 0.31
TARDBP-228ENST00000629725 EIF3KQ9UBQ5 218 aaKnown RBP16.98■□□□□ 0.31
TARDBP-228ENST00000629725 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.98■□□□□ 0.31
TARDBP-228ENST00000629725 SLC13A4Q9UKG4 626 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms