RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 SCRIBQ14160 1630 aa2.9□□□□□ -1.94
BRCA1-229ENST00000621897 LRRK1Q38SD2 2015 aa2.9□□□□□ -1.94
BRCA1-229ENST00000621897 ROCK1Q13464 1354 aa2.9□□□□□ -1.94
BRCA1-229ENST00000621897 A0A1W2PPV9 198 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 A8MX80 341 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 E5RI56 91 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 H0YL77 283 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 PGRMC1O00264 195 aaKnown RBP2.9□□□□□ -1.95
BRCA1-229ENST00000621897 ZBTB5O15062 677 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 SIVA1O15304 175 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 TAPBPO15533 448 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 SNAI2O43623 268 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 CHST1O43916 411 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 HUS1O60921 280 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 TMEM50AO95807 157 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 IGF1P05019 195 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 ALDOBP05062 364 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 GSTT2P0CG29 244 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 GSTT2BP0CG30 244 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 ZNF43P17038 809 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 MAGP20916 626 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 IL2RGP31785 369 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 SLC26A3P40879 764 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 HTR5AP47898 357 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 TUFMP49411 452 aaKnown RBP2.9□□□□□ -1.95
BRCA1-229ENST00000621897 NOVA1P51513 510 aaKnown RBP2.9□□□□□ -1.95
BRCA1-229ENST00000621897 CCR8P51685 355 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 MNAT1P51948 309 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 PLK1P53350 603 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 HSPA2P54652 639 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 NUP107P57740 925 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 AP3S2P59780 193 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 KCNJ2P63252 427 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 MRPS6P82932 125 aaKnown RBP2.9□□□□□ -1.95
BRCA1-229ENST00000621897 CDKL1Q00532 357 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 REEP5Q00765 189 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 EXOC3L4Q17RC7 722 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 CELF3Q5SZQ8 465 aaKnown RBP2.9□□□□□ -1.95
BRCA1-229ENST00000621897 MARCH8Q5T0T0 291 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 SLC22A10Q63ZE4 541 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 C22orf42Q6IC83 251 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 UQCC3Q6UW78 93 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 APOOLQ6UXV4 268 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 ZNF562Q6V9R5 426 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 RTL4Q6ZR62 310 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 MOB2Q70IA6 237 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 NET1Q7Z628 596 aaPredicted RBP2.9□□□□□ -1.95
BRCA1-229ENST00000621897 MOB3BQ86TA1 216 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 ZNF546Q86UE3 836 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 ZNF100Q8IYN0 542 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 IQCKQ8N0W5 287 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 ZNF786Q8N393 782 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 CSNK1A1LQ8N752 337 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 INO80EQ8NBZ0 244 aaPredicted RBP2.9□□□□□ -1.95
BRCA1-229ENST00000621897 C19orf18Q8NEA5 215 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 CCDC112Q8NEF3 446 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 STXBP6Q8NFX7 210 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 FAM110BQ8TC76 370 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 LGALS14Q8TCE9 139 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 FRAT1Q92837 279 aaPredicted RBP2.9□□□□□ -1.95
BRCA1-229ENST00000621897 PSMG2Q969U7 264 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 BIRC7Q96CA5 298 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 DNAJC1Q96KC8 554 aaKnown RBP2.9□□□□□ -1.95
BRCA1-229ENST00000621897 CEP19Q96LK0 163 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 MAGEB18Q96M61 343 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 SERPINB11Q96P15 392 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 TAAR1Q96RJ0 339 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 MBOAT4Q96T53 435 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 NXF3Q9H4D5 531 aaKnown RBP2.9□□□□□ -1.95
BRCA1-229ENST00000621897 KIR3DX1Q9H7L2 352 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 FOLH1BQ9HBA9 442 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 SAMSN1Q9NSI8 373 aaKnown RBP2.9□□□□□ -1.95
BRCA1-229ENST00000621897 USE1Q9NZ43 259 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 TMEM9Q9P0T7 183 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 MYEF2Q9P2K5 600 aaKnown RBP2.9□□□□□ -1.95
BRCA1-229ENST00000621897 HYOU1Q9Y4L1 999 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 USP16Q9Y5T5 823 aa2.9□□□□□ -1.95
BRCA1-229ENST00000621897 RAI1Q7Z5J4 1906 aaPredicted RBP2.89□□□□□ -1.95
BRCA1-229ENST00000621897 USP47Q96K76 1375 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 LRP5LA4QPB2 252 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 F8VP50 259 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 H3BN98 237 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 SMLR1H3BR10 107 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 PANO1I0J062 215 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 B4GALT5O43286 388 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 XRCC2O43543 280 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 AIREO43918 545 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 RAB3DO95716 219 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 GAPDHP04406 335 aaKnown RBP2.89□□□□□ -1.95
BRCA1-229ENST00000621897 H2BFMP0C1H6 154 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 PRPS1L1P21108 318 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 HSD11B1P28845 292 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 MAS1LP35410 378 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 HPCAL1P37235 193 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 RPL13AP40429 203 aaKnown RBP2.89□□□□□ -1.95
BRCA1-229ENST00000621897 AQP2P41181 271 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 CSKP41240 450 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 SLC1A2P43004 574 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 SMARCA2P51531 1590 aa2.89□□□□□ -1.95
BRCA1-229ENST00000621897 SGSHP51688 502 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms