RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 MEP1BQ16820 701 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 PRAMEF17Q5VTA0 474 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 OR5M10Q6IEU7 315 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 OR4C16Q8NGL9 310 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 C15orf40Q8WUR7 153 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 ELMOD3Q96FG2 381 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 GTF2A1LQ9UNN4 478 aa18.28■□□□□ 0.52
SHKBP1-225ENST00000600733 GGT3PA6NGU5 568 aa18.27■□□□□ 0.52
SHKBP1-225ENST00000600733 TMEM150CB9EJG8 249 aa18.27■□□□□ 0.52
SHKBP1-225ENST00000600733 H7C417 338 aa18.27■□□□□ 0.52
SHKBP1-225ENST00000600733 CTAG2O75638 210 aa18.27■□□□□ 0.52
SHKBP1-225ENST00000600733 SCO1O75880 301 aa18.27■□□□□ 0.52
SHKBP1-225ENST00000600733 KDM4BO94953 1096 aa18.27■□□□□ 0.52
SHKBP1-225ENST00000600733 DDAH2O95865 285 aa18.27■□□□□ 0.52
SHKBP1-225ENST00000600733 IGKV3-11P04433 115 aa18.27■□□□□ 0.52
SHKBP1-225ENST00000600733 ZP2Q05996 745 aa18.27■□□□□ 0.52
SHKBP1-225ENST00000600733 UXS1Q8NBZ7 420 aa18.27■□□□□ 0.52
SHKBP1-225ENST00000600733 ZNF721Q8TF20 911 aa18.27■□□□□ 0.52
SHKBP1-225ENST00000600733 GPN1Q9HCN4 374 aaPredicted RBP18.27■□□□□ 0.52
SHKBP1-225ENST00000600733 MTFP1Q9UDX5 166 aa18.27■□□□□ 0.52
SHKBP1-225ENST00000600733 SLC22A13Q9Y226 551 aa18.27■□□□□ 0.52
SHKBP1-225ENST00000600733 MAB21L2Q9Y586 359 aa18.27■□□□□ 0.52
SHKBP1-225ENST00000600733 PLSCR5A0PG75 271 aa18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 XKRYO14609 159 aa18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 GIPP09681 153 aaPredicted RBP18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 POU3F4P49335 361 aa18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 OPCMLQ14982 345 aa18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 ANKRD16Q6P6B7 361 aa18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 METTL21AQ8WXB1 218 aa18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 OR1F2PQ96R84 312 aa18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 MNTQ99583 582 aa18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 NUDT9Q9BW91 350 aa18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 DHCR7Q9UBM7 475 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 PNPP00491 289 aa18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 IL5P05113 134 aa18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 IL12BP29460 328 aa18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 ELOCQ15369 112 aa18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 MARVELD3Q96A59 401 aa18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 GINS4Q9BRT9 223 aa18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 TPSD1Q9BZJ3 242 aa18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 CUTCQ9NTM9 273 aa18.26■□□□□ 0.51
SHKBP1-225ENST00000600733 OR2M5A3KFT3 312 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 FITM1A5D6W6 292 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 TLCD2A6NGC4 264 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 MECP2P51608 486 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 NR0B1P51843 470 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 OC90Q02509 493 aaPredicted RBP18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 ETFDHQ16134 617 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 ASPHD2Q6ICH7 369 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 BPHLQ86WA6 291 aaPredicted RBP18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 CCDC120Q96HB5 630 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 SFXN2Q96NB2 322 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 OR8B4Q96RC9 309 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 B9D1Q9UPM9 204 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 TRAV36DV7A0A075B6V5 113 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 TRAV18A0A075B6X5 111 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 SNRPGP15A8MWD9 76 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 OR2A4O95047 310 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 SLC6A8P48029 635 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 UBE2MP61081 183 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 RAB14P61106 215 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 SLC17A1Q14916 467 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 RBMS2Q15434 407 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 ACKR1Q16570 336 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 C9orf40Q8IXQ3 194 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 PRSS58Q8IYP2 241 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 OIT3Q8WWZ8 545 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 OR2A7Q96R45 310 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 PTDSS2Q9BVG9 487 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 C12orf10Q9HB07 376 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 MRTO4Q9UKD2 239 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 FREM3P0C091 2139 aa18.25■□□□□ 0.51
SHKBP1-225ENST00000600733 LILRA5A6NI73 299 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 RGS11O94810 467 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 SIX6O95475 246 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 WNT11O96014 354 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 RLN1P04808 185 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 SPARCP09486 303 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 RAP2BP61225 183 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 BIKQ13323 160 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 C2orf68Q2NKX9 166 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 DEFB133Q30KQ1 61 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 CHMP1BQ7LBR1 199 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 NUP54Q7Z3B4 507 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 PLPP7Q8NBV4 271 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 OR5M1Q8NGP8 315 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 LRRC20Q8TCA0 184 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 DHRS9Q9BPW9 319 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 GSX2Q9BZM3 304 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 MRPL22Q9NWU5 206 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 CDV3Q9UKY7 258 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 IGKV3D-11A0A0A0MRZ8 115 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 A0A1W2PPL8 197 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 PRSS37A4D1T9 235 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 L7N2F9 121 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 PHYHO14832 338 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 SLC16A7O60669 478 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 SLC25A12O75746 678 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 FAUP35544 74 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 SCAND1P57086 179 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms