RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 OR10G3Q8NGC4 313 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 ASB10Q8WXI3 467 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 RELTQ969Z4 430 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 MRGPRX4Q96LA9 322 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 DCBLD2Q96PD2 775 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 SLC39A1Q9NY26 324 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 CAMK2AQ9UQM7 478 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 LOC102723996A0A087X1L8 192 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 C9J4A7 227 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 CTDSPLO15194 276 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 RAF1P04049 648 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 DPP4P27487 766 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 CRABP1P29762 137 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 KIR3DL2P43630 455 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 NKX2-5P52952 324 aaPredicted RBP17.68■□□□□ 0.42
CLIP3-206ENST00000593074 ETFDHQ16134 617 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 PLPPR5Q32ZL2 321 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 SLC36A2Q495M3 483 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 HES5Q5TA89 166 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 ZNF679Q8IYX0 411 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 YIPF5Q969M3 257 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 CREB3L1Q96BA8 519 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 FOXN4Q96NZ1 517 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 MRI1Q9BV20 369 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 SLITRK2Q9H156 845 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 NEK6Q9HC98 313 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 TCF7L1Q9HCS4 588 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 RABL2AQ9UBK7 228 aaPredicted RBP17.68■□□□□ 0.42
CLIP3-206ENST00000593074 RABL2BQ9UNT1 228 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 ATP6V1G1O75348 118 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 DAP3P51398 398 aaKnown RBP17.68■□□□□ 0.42
CLIP3-206ENST00000593074 ZNF41P51814 821 aaPredicted RBP17.68■□□□□ 0.42
CLIP3-206ENST00000593074 AGFG1P52594 562 aaKnown RBP17.68■□□□□ 0.42
CLIP3-206ENST00000593074 GLO1Q04760 184 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 SLC17A1Q14916 467 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 PCOLCEQ15113 449 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 MEP1BQ16820 701 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 TEX30Q5JUR7 227 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 ASB18Q6ZVZ8 466 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 SLC35D2Q76EJ3 337 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 ZNF433Q8N7K0 673 aaPredicted RBP17.68■□□□□ 0.42
CLIP3-206ENST00000593074 ZNF676Q8N7Q3 588 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 ELP5Q8TE02 316 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 POTEKPQ9BYX7 375 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 ABCG5Q9H222 651 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 METTL7AQ9H8H3 244 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 CHST11Q9NPF2 352 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 SDHAF3Q9NRP4 125 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 PTRH2Q9Y3E5 179 aaKnown RBP17.68■□□□□ 0.42
CLIP3-206ENST00000593074 ALPK2Q86TB3 2170 aa17.68■□□□□ 0.42
CLIP3-206ENST00000593074 CENPBD1B2RD01 187 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 GSTZ1O43708 216 aaPredicted RBP17.67■□□□□ 0.42
CLIP3-206ENST00000593074 BTCP35070 178 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 CCR9P51686 369 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 ADAM8P78325 824 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 BTBD16Q32M84 506 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 PLA1AQ53H76 456 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 WDR38Q5JTN6 314 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 LRRN1Q6UXK5 716 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 ESPNLQ6ZVH7 1005 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 LRRTM1Q86UE6 522 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 CMTM4Q8IZR5 234 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 KDM8Q8N371 416 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 GPR148Q8TDV2 347 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 SLC25A38Q96DW6 304 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 SPACA9Q96E40 222 aaPredicted RBP17.67■□□□□ 0.42
CLIP3-206ENST00000593074 RASL10BQ96S79 203 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 ELOVL3Q9HB03 270 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 FANCFQ9NPI8 374 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 AKAP7Q9P0M2 348 aaPredicted RBP17.67■□□□□ 0.42
CLIP3-206ENST00000593074 ALG5Q9Y673 324 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 CACNG2Q9Y698 323 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 ARPC4-TTLL3A0A0A6YYG9 625 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 LIPT2A6NK58 231 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 GPR171O14626 319 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 ORC5O43913 435 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 SPARCP09486 303 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 IFNGR1P15260 489 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 ADRA2CP18825 462 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 SOX2P48431 317 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 DGCR2P98153 550 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 ANGPT1Q15389 498 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 OTPQ5XKR4 325 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 FAM205BPQ63HN1 556 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 FAM198BQ6UWH4 519 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 OR10AC1Q8NH08 325 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 RNF128Q8TEB7 428 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 UBASH3BQ8TF42 649 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 THRSPQ92748 146 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 KCNK17Q96T54 332 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 LIN7BQ9HAP6 207 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 ALKBH4Q9NXW9 302 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 N6AMT1Q9Y5N5 214 aa17.67■□□□□ 0.42
CLIP3-206ENST00000593074 NPIPA5E9PKD4 350 aa17.66■□□□□ 0.42
CLIP3-206ENST00000593074 EFNA2O43921 213 aa17.66■□□□□ 0.42
CLIP3-206ENST00000593074 UMODP07911 640 aa17.66■□□□□ 0.42
CLIP3-206ENST00000593074 CALCBP10092 127 aa17.66■□□□□ 0.42
CLIP3-206ENST00000593074 PTGS2P35354 604 aa17.66■□□□□ 0.42
CLIP3-206ENST00000593074 TLE3Q04726 772 aa17.66■□□□□ 0.42
CLIP3-206ENST00000593074 ZNF454Q8N9F8 522 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms