RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 NOXO1Q8NFA2 376 aa9.08□□□□□ -0.96
APOC1-201ENST00000586638 OR6N2Q8NGY6 317 aa9.08□□□□□ -0.96
APOC1-201ENST00000586638 C4orf36Q96KX1 117 aa9.08□□□□□ -0.96
APOC1-201ENST00000586638 SNX18Q96RF0 628 aa9.08□□□□□ -0.96
APOC1-201ENST00000586638 UCN2Q96RP3 112 aa9.08□□□□□ -0.96
APOC1-201ENST00000586638 TIMP4Q99727 224 aa9.08□□□□□ -0.96
APOC1-201ENST00000586638 BCL7BQ9BQE9 202 aa9.08□□□□□ -0.96
APOC1-201ENST00000586638 CHCHD6Q9BRQ6 235 aa9.08□□□□□ -0.96
APOC1-201ENST00000586638 NUAK2Q9H093 628 aa9.08□□□□□ -0.96
APOC1-201ENST00000586638 RNF167Q9H6Y7 350 aa9.08□□□□□ -0.96
APOC1-201ENST00000586638 EXOSC4Q9NPD3 245 aaKnown RBP9.08□□□□□ -0.96
APOC1-201ENST00000586638 INPP5EQ9NRR6 644 aa9.08□□□□□ -0.96
APOC1-201ENST00000586638 NDUFB11Q9NX14 153 aa9.08□□□□□ -0.96
APOC1-201ENST00000586638 MOKQ9UQ07 419 aa9.08□□□□□ -0.96
APOC1-201ENST00000586638 KLHDC2Q9Y2U9 406 aa9.08□□□□□ -0.96
APOC1-201ENST00000586638 CAB39Q9Y376 341 aaPredicted RBP9.08□□□□□ -0.96
APOC1-201ENST00000586638 CNTRLQ7Z7A1 2325 aa9.08□□□□□ -0.96
APOC1-201ENST00000586638 ALPK2Q86TB3 2170 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 IGLV1-36A0A0B4J1U3 117 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 IGKV1D-43A0A0B4J1Z2 117 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 NPIPB13A6NJU9 1138 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 GJE1A6NN92 205 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 VGLL3A8MV65 326 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 PRR32B1ATL7 298 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 NPIPB4C9JG80 1138 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 J3QLW9 94 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 SLC22A1O15245 554 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 MAGEB4O15481 346 aaPredicted RBP9.07□□□□□ -0.96
APOC1-201ENST00000586638 SLC16A7O60669 478 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 CD46P15529 392 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 CPEP16870 476 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 ZNF19P17023 458 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 ZNF182P17025 639 aaPredicted RBP9.07□□□□□ -0.96
APOC1-201ENST00000586638 GNLYP22749 145 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 FKBP2P26885 142 aaKnown RBP9.07□□□□□ -0.96
APOC1-201ENST00000586638 RPS27P42677 84 aaKnown RBP9.07□□□□□ -0.96
APOC1-201ENST00000586638 SUCLG1P53597 346 aaKnown RBP9.07□□□□□ -0.96
APOC1-201ENST00000586638 CSNK2A1P68400 391 aaPredicted RBP9.07□□□□□ -0.96
APOC1-201ENST00000586638 PMP22Q01453 160 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 ETFDHQ16134 617 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 ZNF239Q16600 458 aaKnown RBP9.07□□□□□ -0.96
APOC1-201ENST00000586638 CARD17Q5XLA6 110 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 HBMQ6B0K9 141 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 NHLRC1Q6VVB1 395 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 TMPRSS11AQ6ZMR5 421 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 TRILQ7L0X0 811 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 PXKQ7Z7A4 578 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 GGNQ86UU5 652 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 CDC20BQ86Y33 519 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 PHC2Q8IXK0 858 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 TIGD4Q8IY51 512 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 SYT14Q8NB59 555 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 GALNT11Q8NCW6 608 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 UFD1Q92890 307 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 DTNBP1Q96EV8 351 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 TRMT61AQ96FX7 289 aaKnown RBP9.07□□□□□ -0.96
APOC1-201ENST00000586638 SCMH1Q96GD3 660 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 OXGR1Q96P68 337 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 KCNK17Q96T54 332 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 ISYNA1Q9NPH2 558 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 FANCFQ9NPI8 374 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 B9D1Q9UPM9 204 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 TRAPPC4Q9Y296 219 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 GRIP1Q9Y3R0 1128 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 NOX1Q9Y5S8 564 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 LIPGQ9Y5X9 500 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 FKBP7Q9Y680 259 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 ITPR2Q14571 2701 aa9.07□□□□□ -0.96
APOC1-201ENST00000586638 ZNF670-ZNF695F2Z2N8 137 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 SMAD9O15198 467 aaKnown RBP9.06□□□□□ -0.96
APOC1-201ENST00000586638 AKAP8O43823 692 aaKnown RBP9.06□□□□□ -0.96
APOC1-201ENST00000586638 CXCL13O43927 109 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 GPX5O75715 221 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 GLSO94925 669 aaPredicted RBP9.06□□□□□ -0.96
APOC1-201ENST00000586638 HLA-DQA2P01906 255 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 MT-ND5P03915 603 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 HPNP05981 417 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 UQCRFS1P47985 274 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 SERPINB10P48595 397 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 GFRA1P56159 465 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 CLDN17P56750 224 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 OR12D2P58182 307 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 PPIAP62937 165 aaKnown RBP9.06□□□□□ -0.96
APOC1-201ENST00000586638 LSAMPQ13449 338 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 CAMK2DQ13557 499 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 TPBGQ13641 420 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 MEP1BQ16820 701 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 CDONQ4KMG0 1287 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 VASNQ6EMK4 673 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 TMEM225Q6GV28 225 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 SLC16A9Q7RTY1 509 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.06□□□□□ -0.96
APOC1-201ENST00000586638 ALDH16A1Q8IZ83 802 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 OR2V1Q8NHB1 315 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 CPT1CQ8TCG5 803 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 SSC4DQ8WTU2 575 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 ADGRG7Q96K78 797 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 INTS14Q96SY0 518 aa9.06□□□□□ -0.96
APOC1-201ENST00000586638 NAA11Q9BSU3 229 aaPredicted RBP9.06□□□□□ -0.96
APOC1-201ENST00000586638 CENPOQ9BU64 300 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms