RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 CCDC36Q8IYA8 594 aa20.24■□□□□ 0.83
LSM7-202ENST00000585395 OR1K1Q8NGR3 316 aa20.24■□□□□ 0.83
LSM7-202ENST00000585395 SPATA3Q8NHX4 192 aa20.24■□□□□ 0.83
LSM7-202ENST00000585395 NANOS1Q8WY41 292 aaKnown RBP20.24■□□□□ 0.83
LSM7-202ENST00000585395 STMN2Q93045 179 aa20.24■□□□□ 0.83
LSM7-202ENST00000585395 GTPBP3Q969Y2 492 aaKnown RBP20.24■□□□□ 0.83
LSM7-202ENST00000585395 BOD1Q96IK1 185 aa20.24■□□□□ 0.83
LSM7-202ENST00000585395 TSPAN32Q96QS1 320 aa20.24■□□□□ 0.83
LSM7-202ENST00000585395 GPA33Q99795 319 aa20.24■□□□□ 0.83
LSM7-202ENST00000585395 IFT27Q9BW83 186 aa20.24■□□□□ 0.83
LSM7-202ENST00000585395 SMURF2Q9HAU4 748 aa20.24■□□□□ 0.83
LSM7-202ENST00000585395 KIF17Q9P2E2 1029 aa20.24■□□□□ 0.83
LSM7-202ENST00000585395 IDH3BO43837 385 aa20.23■□□□□ 0.83
LSM7-202ENST00000585395 INHBBP09529 407 aa20.23■□□□□ 0.83
LSM7-202ENST00000585395 NOS3P29474 1203 aa20.23■□□□□ 0.83
LSM7-202ENST00000585395 LGALS3BPQ08380 585 aa20.23■□□□□ 0.83
LSM7-202ENST00000585395 THEM4Q5T1C6 240 aa20.23■□□□□ 0.83
LSM7-202ENST00000585395 CLEC9AQ6UXN8 241 aa20.23■□□□□ 0.83
LSM7-202ENST00000585395 CD300LDQ6UXZ3 194 aa20.23■□□□□ 0.83
LSM7-202ENST00000585395 C20orf204Q6ZNR8 217 aa20.23■□□□□ 0.83
LSM7-202ENST00000585395 SVOPLQ8N434 492 aa20.23■□□□□ 0.83
LSM7-202ENST00000585395 WFDC11Q8NEX6 87 aa20.23■□□□□ 0.83
LSM7-202ENST00000585395 MAGEE2Q8TD90 523 aaPredicted RBP20.23■□□□□ 0.83
LSM7-202ENST00000585395 PIGTQ969N2 578 aa20.23■□□□□ 0.83
LSM7-202ENST00000585395 FEVQ99581 238 aa20.23■□□□□ 0.83
LSM7-202ENST00000585395 MRPL13Q9BYD1 178 aaKnown RBP20.23■□□□□ 0.83
LSM7-202ENST00000585395 DENND2DQ9H6A0 471 aaPredicted RBP20.23■□□□□ 0.83
LSM7-202ENST00000585395 BEX4Q9NWD9 120 aaPredicted RBP20.23■□□□□ 0.83
LSM7-202ENST00000585395 BAIAP2Q9UQB8 552 aa20.23■□□□□ 0.83
LSM7-202ENST00000585395 RNF115Q9Y4L5 304 aa20.23■□□□□ 0.83
LSM7-202ENST00000585395 PRR14LQ5THK1 2151 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 FAM171A2A8MVW0 826 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 ARPC3O15145 178 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 ARHGEF9O43307 516 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 DHHO43323 396 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 MGRN1O60291 552 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 HEXAP06865 529 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 QDPRP09417 244 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 CD53P19397 219 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 GUCA1AP43080 201 aaPredicted RBP20.22■□□□□ 0.83
LSM7-202ENST00000585395 ARF1P84077 181 aaKnown RBP20.22■□□□□ 0.83
LSM7-202ENST00000585395 PRIMA1Q86XR5 153 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 ZDHHC13Q8IUH4 622 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 ATG16L2Q8NAA4 619 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 OR52N5Q8NH56 324 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 ZNF519Q8TB69 540 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 PYDC1Q8WXC3 89 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 CENPNQ96H22 339 aaPredicted RBP20.22■□□□□ 0.83
LSM7-202ENST00000585395 SAMD8Q96LT4 415 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 SLC17A5Q9NRA2 495 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 TBC1D23Q9NUY8 699 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 IER3IP1Q9Y5U9 82 aa20.22■□□□□ 0.83
LSM7-202ENST00000585395 DSCAMO60469 2012 aa20.21■□□□□ 0.83
LSM7-202ENST00000585395 SMPD2O60906 423 aa20.21■□□□□ 0.83
LSM7-202ENST00000585395 FARS2O95363 451 aaKnown RBP20.21■□□□□ 0.83
LSM7-202ENST00000585395 LOXP28300 417 aaPredicted RBP20.21■□□□□ 0.83
LSM7-202ENST00000585395 KRR1Q13601 381 aaKnown RBP20.21■□□□□ 0.83
LSM7-202ENST00000585395 HIST3H3Q16695 136 aa20.21■□□□□ 0.83
LSM7-202ENST00000585395 KLHL17Q6TDP4 642 aa20.21■□□□□ 0.83
LSM7-202ENST00000585395 JAZF1Q86VZ6 243 aa20.21■□□□□ 0.83
LSM7-202ENST00000585395 SYT14Q8NB59 555 aa20.21■□□□□ 0.83
LSM7-202ENST00000585395 TEX47Q8TBZ9 253 aa20.21■□□□□ 0.83
LSM7-202ENST00000585395 Q96M85 177 aa20.21■□□□□ 0.83
LSM7-202ENST00000585395 ERMAPQ96PL5 475 aaPredicted RBP20.21■□□□□ 0.83
LSM7-202ENST00000585395 KCNK17Q96T54 332 aa20.21■□□□□ 0.83
LSM7-202ENST00000585395 FOXB1Q99853 325 aa20.21■□□□□ 0.83
LSM7-202ENST00000585395 IL20Q9NYY1 176 aa20.21■□□□□ 0.83
LSM7-202ENST00000585395 ADAM18Q9Y3Q7 739 aa20.21■□□□□ 0.83
LSM7-202ENST00000585395 STAB1Q9NY15 2570 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 G3V2T6 193 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 PPP1R3DO95685 299 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 TXNDC12O95881 172 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 PLAUP00749 431 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 ZNF23P17027 643 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 FOXG1P55316 489 aaPredicted RBP20.2■□□□□ 0.82
LSM7-202ENST00000585395 BSPH1Q075Z2 132 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 TBRG1Q3YBR2 411 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 PHYHD1Q5SRE7 291 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 NCMAPQ5T1S8 102 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 DNM1P34Q6PK57 102 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 THSD4Q6ZMP0 1018 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 ZNF813Q6ZN06 617 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 LINGO2Q7L985 606 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 FAM122BQ7Z309 247 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 LRTOMTQ8WZ04 291 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 AKAP1Q92667 903 aaKnown RBP eCLIP20.2■□□□□ 0.828e-6■■□□□ 11.6
LSM7-202ENST00000585395 HDAC2Q92769 488 aaKnown RBP20.2■□□□□ 0.82
LSM7-202ENST00000585395 BCL2L2Q92843 193 aaPredicted RBP20.2■□□□□ 0.82
LSM7-202ENST00000585395 MCHR2Q969V1 340 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 OSBPL10Q9BXB5 764 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 TEX12Q9BXU0 123 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 IL20RAQ9UHF4 553 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 ENOPH1Q9UHY7 261 aa20.2■□□□□ 0.82
LSM7-202ENST00000585395 TEX13CA0A0J9YWL9 993 aa20.19■□□□□ 0.82
LSM7-202ENST00000585395 A0A1W2PR80 420 aa20.19■□□□□ 0.82
LSM7-202ENST00000585395 KIAA1324LA8MWY0 1029 aaPredicted RBP20.19■□□□□ 0.82
LSM7-202ENST00000585395 H3BN98 237 aa20.19■□□□□ 0.82
LSM7-202ENST00000585395 RENP00797 406 aa20.19■□□□□ 0.82
LSM7-202ENST00000585395 ZNF26P17031 533 aaPredicted RBP20.19■□□□□ 0.82
LSM7-202ENST00000585395 ZNF133P52736 654 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms